Gene detail

Detailed information of HK74SY85_g9906 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g9906	EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED	ctg65	2911838	2914826	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g9906

ATGTCGAAATTCTTTGCTGCCAGTTCAGGCAGCGAGAGCGAATCGAGCGATGATGATCAACCAATTGTCGTCAAACAAGCTCCAGGTATTTCAAGGTAAAAAACTAAACGTTTTGATGGGCTTCTGTTATTTTTTTTCGTGGCCCTCGTGGGGTTTTTGCATTTGTTCAGTTTCTCTGACGTGTCTTTTAATACTGAAATCTTTAAATATCATTGGATATTAAACGTAGATTGTTGCTCCCGATTTACATTTTGAGAGTTTTTAGGTAATAACCACTTGTTTGTCTTCTGTATCCAGAGCATTTGTGTTTAGCGATGATGAAGAAGAAACCAAGAGGGTCGTCAGAAGTCAGAAAGACAAGAGGTAAGCTTGTATATTTCATCCAGAAATTAAAGATCATCGCTTTTACTTCTAAATCTCAATATTCCTGAAATTCAACGAAAGAAGAAACGAAATACATGTACATTGGAATCGAAGTTGTTTACTGAGTTGTGTCAAAATCAAATCTAATGTTTAGTTACATTAATTGCATCTGTTTAGAATTCATAACTTTAGACTAGACACAACACAGGTAAATTTTATACTATTGATGTGGCATTTAAAATTGCAGAAATccccaccccccccccccccccccccccccccaccccccccccccccccccacccATTTCTCACCCTTCTCTTCTCCTCTCCAGTTCTAACACTTCCCTCCCCCACTGCCCCCAATATGACACCAGTCCCGAAGTAGCTTTCCCTAGATTTTGGGAAATAGTGAATAATATACTGGGAAACAGCCAGGTACATGTATAAGCGTGGCATTTCAATGCTCTGATTATTCTTTGTACTGGTTACAAAATACTGTAATGTCTAAATttatttgaatattattattattattattaCCTTTTTAGGTTTGATGATCTTAAAAATGTTATCAAGCAACTTAAAAACTATAAAAAGATTAAAGACATGGCCAAGGTTTTCTCAGGTACCTGTAACTACATGTATATATATtagaacagatttcttaatgagtgggaagtggttacagtactgtctgtgctgtactgtgatggtaccgtaccatacccaagcattctgattggacaagcagagattttggcgatgtaattggttgaatagattaccgtaactctgtgccgtaggtttcccactcatacaaaaTATAACACTGTATGCTGTGTACATACATAAATGTTACATGTATCTTATGCTAGTTGCCTTGTGATGATGAGAAAATTGAAACTCCTGACAAGCTGTGGAGGCTTAAGAAAACTACAATTCTCTGAAAAAGGCAACAAGTACATGTATTGTCATTAATTCTCTTCAGCATAGTTCATTGTAATACTACAATGTATAttcttgagaatgaggctagtcatcttgattcttcttgtgttgtttggtattctaccagcaagagaagGGTATATCTAATTAGCATAGCTAGTTTAAATACAGCCCTGTGTGGAAAATGGTGTATTATGGTCTTTCAATATTATGGACACCATTTCTTGTGAGATTTAATGTTATTTATTTCTCCAATAGAATATGAGAATCTTGGTAAAGCAGTTAACAAAGCCAAAAGTGTGATTGATAAAGAGGGTATTCCACAGTTTTTTATCAGATGCCTGGCTGACCTTGAGGACTTTGTGAAAGAGGTATAGTATGGTCAGGATAAGTCATCGTCATAAACCCATTGATTGTTTGTTTGTTAAATATTTTTTGGTGTTTTTTTTTTTTACCACCTAAAAAACCCTGTGCTTATTAGATGTGGTTAAATTAAATTAGGCAAAGTTAAACTCCAGCaatgatatgctcattagttggagatgtgcctcattgggtcgttttgtgctatctcatccttttgggtgacagcttgttatctaaagttgctcagctatcgcctcacgtcaacgcatgaatcgctaaaacgccaatcacaggaatggcttgttatctaattgcatactggccagcttatcgccatcacatgctcaatgcatgattgcaatcgtgattcgcaagcttgctgaccgcagaatgaatggaatttgggcttggccctaatcttgggttaaattacgttcatgcgactatagactgctcgccatatgctagttcgtcgatcactagaacgcacgtatcggcAAATTtttccctcccacccgtcccaaaggtaagtactctacactgattggtcagtgtgacggtgctcagtgggttgtgacagggttgccatggttactgctactaatcgaagccaggcacctcccactgatcaagcaccaatgccaaagctcatctattgatgatgagtttaacATTATTTCTTGAAACCTGTGGAAACATCATGACATGAACGCAGTGTCAATTTTGTACCAAACTTCTTTGGGAAAACATGTTACCAGCACTTCAAGTTgcaagcataaaacaataatattatagggactacaatttgccacaaaagtcaccaatttagcctgtgcaggtaaaatccaaaaggcaacttagaaaaaaacttCAGAATTCCTTTATCTTGTACCTCAAAATATCCttaccaccgattctgatgaaacgcgactgtctagactttgaggactgagtttgtacattgctttaggtggaattatattaagctctgacgctagaataacgttcatatttgtttttccttttaagaaatggctaataaaagtaatagtgagaataataaacaataaaattgaattattgaacgaaaactacgcatatttcgataattcacatgtgattgacgtccatctaatgcaaagtacaaaccatcaaatcaaagtctaggtggtcgcgtttcatcggaatcggcggtaaTTTGAGGAAAGTTAAATTCTTAAATCGTTTTGTTCATTGATTAGAACTGGGAAGATACTGAAGGAAGGAAGAAGCTTAGTAAAGTTAATGCAAGGGCTCTATCAACTCTTCGTATGTCGAAATTCTTTGCTGCCAGTTCAGGCAGCGAGAGCGAATCGAGCGATGATGATCAACCAATTGTCGTCAAACAAGCTCCAGGTATTTCAAGAGCATTTGTGTTTAGCGATGATGAAGAAGAAACCAAGAGGGTCGTCAGAAGTCAGAAAGACAAGAGGTTTGATGATCTTAAAAATGTTATCAAGCAACTTAAAAACTATAAAAAGATTAAAGACATGGCCAAGGTTTTCTCAGAATATGAGAATCTTGGTAAAGCAGTTAACAAAGCCAAAAGTGTGATTGATAAAGAGGGTATTCCACAGTTTTTTATCAGATGCCTGGCTGACCTTGAGGACTTTGTGAAAGAGAACTGGGAAGATACTGAAGGAAGGAAGAAGCTTAGTAAAGTTAATGCAAGGGCTCTATCAACTCTTCGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05470	eIF-3c_N	Eukaryotic translation initiation factor 3 subunit 8 N-terminus	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008905	Domain	Eukaryotic translation initiation factor 3 subunit C, N-terminal domain	Interproscan
IPR027516	Family	Eukaryotic translation initiation factor 3 subunit C	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13937	EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005852	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0006413	Biological Process	translational initiation	Interproscan
GO:0031369	Molecular Function	translation initiation factor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-