Gene detail

Detailed information of Hgig_03243 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_03243	NEUROBLASTOMA-AMPLIFIED SEQUENCE	Chromosome3	198755948	199250676	+

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_03243

ATGATACTTTCAGAGAATATACTTTATGAGATCTTAAACACTGCAGAATGGCCAGTTCACCCCCACTTTGCTTCAGCTAGTGAGAGCACAAATGATGGGAGCAATGGCAGTGCAGGTGCTGGAATGTTTGGCCTTCAGTTGGCAAGCATTTCAAGACTGACATCGGCTGTCACCAGTTTACTTACACCATTGCTTCCCTTCTCTCCACATCTCACTCCACAACTAGCAAGTATTGTGGAAAGCAGCTGTTCATGGAAGGTGAGCTTCTGCGGGGCTTCCGACATAGTAGCCATCCTGCAGGACACACAGCTCGAGATACGGCACGCCAGGCAGGACTTCCAGGAGATCATTGCCCGGACGGACACACTTTACTATGACCCGTTTCCTGAGTGGCGCTTGCTTAGCTGGTCCTGCGATGGCTCCCTGCTGGCAGTATCGTACAGCAGCGGCGTCGTGCAACTCTACACAGCGCTGGCACAGCTGCTCTACACCATATACCCGCCCAGGTACAAGGAAGGAGCCGTGTATTCGGAGCCAAGTGCTGCTCTGGCTGCCCTCGTCATCACAGAGGATCAGCTGCCGGATCCCAAGTGGTTGTGGGAGGTTACATGTGTGGAGTACAGTGGAACAGTTCGTAGTTACCTGGTGTCCGGTAATGAAGGCTATCAGAACTGCTCCACCTTCTCCCTCACATCACACTACCATCACGGCATCACCGCTGCTACTATGCACCAGTCCCTGCTGGTGGTGGCTGGTCCGTCACAGCTCATGAATGATCCGTCACTGAGCTACTTTGGTCTGGGGCACGGCATTACTCTCTGGCGCCGTCTCAACCATCATCCTTATTACAAACAGGTGACTCTTATGGAGGACGAGGAATACGAGTGTCCAGCAGTGTCAGTATCCCAGAGACTATTGTCGTGGGTGTCTCGCCCCGCTACGCCGCCCAACACGGCCGTGTGCGTGCGCGTGTCTCCATGTGGTCGCCACCTGGCCGCGCTGCACCTCTCAGGCGCAGTCTCCGTCTGGCACTTCCCGTCGCTCAGGAAAAGCAAATACTGGCAACTGCACGACCAACCAGAGGCGGCTCTGCTCAACACCTCTGCAAGAGCGTTGAGAGAGAAAAATTGCATCAGAAAAGTTGGACCCGGGAAGAAGAAGCAAAGTTGCTTGAAGGCAGGGCAGCCCATCTCACTAGAATGGTGGTGCCGCGACGACGACGACGATGAAACAGGCAGCGGCGCAGAGGACGGGCTGGTGCTGTGCCGGAGTAGCGGTGCACTCACAATTTCATCCATCACAACCTTTGCAAACTTGCTCGGCGAGAACCCAGAGTTCCTTGCCGGTTCTCACATGATCTGTAAGCCTCAGAAAGGTGGGTTCCTGTGTCTGGAGCTTGAACGAATGCTTACCAAACGACATCGTAGCACCAGCGCATCTGCTACTGCTTCGGAACCATATCAGTACAGTGACGGCTATGCTACTGATCTCAGCTACCAGCAGTTTGGCGAGATGGACCCGATGCCCACTGCTGAAGAGGGAGAGGGGGCGCTCTTTGCTACCCTTGTCGACGGTGCTACTGATGCAGATCTTGAGAAGGATGGCGGTCAGCAGCCCGTTGGATATCTTGCCTGGTTCCTGGTGCTATTCTGGCACATCCTGTACTGGCTCACGGATGATCAGAGGTTCCAAGTGTCGGAGCTGGAGAGTGTTGCAGAGAAGTACCGTCTGGTGTGGTTCAAGAGCAGCTCACCAGATCAGCTGTTCGCTAATAAGCTCAAGATGCAGGAATACGGCGAGGCTCTCCTACTCGCCAAATCTTACGACCTTGATACGGACCTGGTGTACATGGAGCAGTGGCGCAACACAGAGCCGACCCTGGCCAGCATAAGCGACTACTTGAGTCGCGTCAGGAACAGAAGCTGTGTGCTGCAGCAGTGCTGCTCTGTGGTGCCAGCCACGCTACTGCCTGCCAGAGAGATGATACTCTACGCACTTAGAGGCACTGATATACACGTGGTGGCCAGTATGGGAAGTGGTGAGGATACGGGAGATTGGATGTCTGGACCGTCGCTGTTTGATTGCGAGGACCAGCAGCAGAGAGATGAGCTGCAGCAGACTCGGGACCAGCTCCTCAAACAGGTGGACTGGATGAATCTGTCCGAGGAGCAGCGCAGCATCATCAGAGTGAGGCAGCGGCTGTTGCGATACCTAGACAGACTCGACATATATGAGATCCTGCTGGGAGGAGGGCAGTTTGCAATGGAACGCTACAACGCTCTGACTTATGCTAAGTTCAGGGACCAGTCGAGCATTGCCGCCTGCCACCAGTTTGCAAGGGAAGGTAACGATGATGCGGTGAGGATAATGTGGACCTACCATGGAGAGGAGACGCTACCACACAGACTGGCGCTGCTCTCAACACTGCCCCCCACGCTGGGACCATTCGAGTACAGAGCGCTGCTGCCGATGTGTGGTTTAGAGGACCAAGTTCATGACTGGGACGAGGGTGCCCTCAGAGAACGGGACTGGTGTGAAGACGACCATCTTGTTGCTGGGCTGCAGTTCAGTAACCCGTCTGAGCAAGTGAATGCGATCTGCTCTCTGTACGCGGCCGCTGCAGGCGTTGCTGACATTTGTGGTGGCGTCGACTCTGTTTCTGATACCGGTGTATCCTTGGCTACTAGCAGCAACAAGTTAACACCCCAGATTGTGAGCAAGTGGTACCAGCTGAGGGCGCGGCAGCTAGAGGGAGACTGTGGCCTCATGGATGCCGCTCTTGATCTGCTGAAGCTTGGCAGGGAGAGAAATGTACCTGACCTGGCGCGGCTGTTGTCTAGCCTGTGTACACTGGAAGTGCTAGTCTACGAGGCTGGGCAAACCCACATGACACTGGATGAGCTCGCTGTTATGGAGCCTGTTGATGTGCTCGCGTTGCTTATGGAGAAGAGTGAGGGCAACAGGTCCCAATACCTGAAGGAGTGGGTGCTACCGTACCTGTCACGCTGTGAGGCTGCACAGGCGGGCTGTAGGGACGTGTTGCTGGCCACCTACCTACAGAGGGAGGCTACTCACAGCCTCGTCATTCCGCTAGTGGTATTGAAGTTGGTGTGCTCGTATCAGGATCTGCTGCAGGGTGATGCCCTGTACGAGTGCGCAGTGAAGTGTGTTTACTCCTGTGAAAACACAGACCAGCTCGACACAGCCACTCAATTGCTAGATGCTTTGCCTGTCACACTGAACAGCGTGTCACTGCTGAGTAAAGTTCGTCTGGAGTTGTGGTGCTGTGGGGTATTGGAGCGGCACGGCGTGGCGGCGCTGCCACGTCTTCTGCTCAACATTGCACAGGAGCAAGCGTTGCAACTGATCACCAAACTCGCACATGCTACGTCCAGGAGATCCAGCGAGCTAAGGTTCACAGTGTGGGAGGAACTTCTGGACGACATGCTGGAACTGCAGCAGAAAGTATTGCCCTGCATAACACCACAGGACTGCTATCAGAGTATTGCTGAAGCTCTCCTGACTTCAGGCAACCGGAAATACATCGACTACGGCGGCGAGTTTCTCCTTGTGAACCGAACAGATGCATCAGCAGCAGCTACAGCTTACACTGCAGACGGCGGCAGCAGTGCAACAGGTAGCAACCCTTACGTTGACGGCGTCGAGTACACGGAGGCCGTGCGACTGGTGGTGGAGGCTGCTAGAGGATACTTCAATACAGCTGAACATTACCGAGATCCTGCCCTCGAATTGGCGAAGCAGTGTCTTGAGCTGATACAGTCAGGGACCGAACAGAAGCTTGACGACGCGGTGCAGGAGGAGAAGGATCTCATCTCTGCTCTCGAAATCTTGCACGAGTTCAACGTTGACAAACTGCCGCTGCAAGTGAGGCTGTGCACTGATCGTGTTCGGTTGGTGATGGCAGCGCTGGAGAGCAGCGGTAGCAGTTGCCTGCAGTATTGGTGGCGAGTAATGCAGCTCGCACAGTTGCTCAGAGTGGAACACGAGGACCAGAAGCTGAGGGAGGTCACGGTTCTGGACCTGCTCGCGCGGCAAGCTATTAAGAGACAGTCACCACTCTCACGAGTGGGAGACTGTACGGTTTCTTGTATGAATGTTCGTGGCTGCGGTCGAGTTGGGAAACAAGACCTGATCGAGAGAATGATAATTGAGAAAAGACTCGATATTTGTGCCTTGAGCGAAACAAAGCTGAAGGGAAAGGGTGAGTTTATGATGGGCAGCATTAAAGGTGTGAAAGCTGGAGTTGGAGAGGGATGCCACGCAAGGGAAGGAGTGGCAATTATGCTGAGTGAAAGGATGTGGAGCATGGTGAGGGATTGGAAAGCAGTATCGTCACGGATTGTGTGGGTCCGACTTAAATGTGGGAGTGAAAAGTGGGTAATAGTGAGTGCCTATGGGCCCGGAAGTGAAAAGACTGTAGAGGAAAGAGAAGAATTTTGGGAGACTCTGAGTGAGTGTGTAAGCAAGTTTGAGCAGAGTGAGAAGATAGTCGTACTGGGTGATATGAACGCGCGAGTTGGAGACGTGGAAGTGGAAGAGGTGATTGGTAAGTTTGGTGTTCCTGGAGTGAACTGGGCAGGTGGAAGAATGGTACAGTTTTGTACAGAGGCTGGTCTGCTTGCGGGAAACACGTGGTTCAAGAAGAAGAGAGTGAATAAGTACACATGGCTGACAGACATGGCTGACAGAAAGGATAAGGCACTTATGGACTGGGTGTTAGTTGATAAGAGGTTAAAAGGTTGTTTGAAGGATGTAAATGTGCTGAGGAGTTGGGGAGGTGTGATTGGAAGTGATCATTTCCTTGTGGTAGCAAAGTTGTGCTGGAAGAGAACAAGGTATGAAAGACAAGAGGAACAGAAGGTAAAGGTGATTAGAGTGAGTGAATTGCTGAAGAAGGAGAAGGCAGAGAAGTACAAGGAGCTGATAGAGGAGGATTGGAGAGCGATGAGAAGTCGGGCAGTTGGGAGCGTAGAAGAGGAGTGGGAAAGTTTCAGAGGTACAATCATGAGGAGATCGGAGGAGGTGTGTGGACTGAGAACAGTTGGAGCCGGAGGAAGGAAGAGTGAATGGTGGTGCACGGAGACGGCTGTGGCAGTGAGGGAGAAGAGAGAGGCATTTGCCTTGTGGCTACAGAGAAAAGACCAAGAGAGTAGGGAGGAGTATAAGAGGAAGAGAAGAGACGCAAGGATAATAATTGCAAAGAACAAAGGAGAAGCGAATAGAAGATGGGGCGAACGAGTAACGAGTGAATTTAGAGAGTCGAAGAAAATATTTTGGAAAAGTGTAAACAGAATGAGGAAGCCCCAAGAGAAGCTTGATGAAGTGGTGAAGGATGAGAATGGCGAAATTCTTTATGAGAGCGAGCAAGTGGTAGAAAGGTGGAGTGGGTACTTTGAGTCACTGTTGAATGTGGAAGACGATAGAAAAGCGAACCTAACCTGTATGGGAAGAGGAGGCGCAACTAGCAGGAAGATGGTAGAGCAAAGGGAAATCGAGAGTCATGAGGTACAGAGAGCAGTCTGCAAGTTGAAGAATGGAAAAGCAGCAGGAGAGGATGGAATAACAAATGAAATGGTGAGGAGTGGTGGATTAGCGATAGTCGAGTGGTTGGGTAAGGGTGATAAGAAGGAATGCAAGAACTACAGAGGCATAAGTTTACTTAGTACGCCTGGAAAAGTGTACGGAAGAGTACTGATCGAGAGAGTAAGTGAAATAACAGAAGTTCAGATTAGAGATGAGCAGGGTGGTTTCAGGAAGGGAAGAGGTTGTGTGGATCAGGTGTTTGCTTTGAAGTGTGTGTGTGAAAAATATTTAGAGAGGGAAAAGGAGGTGTTTGTTGCGTTCATGGACTTAGAAAAGGCATATGACAGAGTGGACAGGATGGCAATGTGGGAGGTGTTGGGAATGTATGGAGTTGGAGGTAAGATCCTTGGTGCGATTAAAAGTATGTACGAGGAGAGTACGGTGTGTGTCAGAATAGGGCGTAAGTTGGGGAGGAAGTTTAAAGTGGATGTAGGCCTGCGTCAGGGATGTGTTATGTCCCCATGGTTGTTCAATATCTTTATCGATGGAGTGGTACGAGAGGTAAACGCACGAGTCTTGGAGCGAGGAGCGGCGCTTATGAGTGATACTGGTGGTGAGTGGCAGGTGAATCAGATACTATATGCGGATGACACTGCATTGATAGCGGATGAAGAGTGTAAGTTGCAGAGACTAGTCAATGAGTTTGGGAGAGTGTGCGAGAGGAGGAAATTGTCTGTGAATGTTGCAAAGAGCAAGGTTATGAGGGTAACGAGAAACGAGAAAGCTGGTGTCATTGAGATCACCTTGAATGGAATAAGAATGGAAGAAGTTAACTCTTTTAGATATTTAGGAGTGGATATTGATAGAGATGGTGGAATGAAGAGCGAGATGAAGCATAGAGTGACAGAAGGAGAGAAAGTCAGTGGTGTCCTGAAGAAGATGTGGAAAGGAGGGGGAATGTCAAGGGATGCTAAGAGAAGTATGTACGAGGGCATAGTAGTGCCGACGTTGCTGTATGGTAGTGAAGTGTGGGCAGCAAGTGCAGAGATTAGAAGAAGGATGGGAGTGTTGGAAATGAAGTGTATGAGAGCTATGTGTGGTGTAAGTATTTGGGATAGAATTAGGAATGAAGAAGTGCGGAGAAGGTGTGGCAGTGAACTAAGTATTGGTGAACGAATGGATAGAAATGTGTTGAGGTGGTATGGTCATGTGGAGAGGATGGAAGAAGAGAGAATGGTTAAAAGAGTGTATAAGTCTAGTGTGGAGGGCAGTAGAAAAGTAGGAAGGCCGAAACAGAGGTGGATGGACGGAGTGAAGGCTGCTGTAGAGCGGAGAGGAGCAAATATCGATTATGCGAGAATGTGCGTGCAGGATCGCGAAAGATGGAGGAGGGAAGTCCATTCTAAGCATATGTGGGCTGCCTGA

Transcript

Hgig_03243

Protein

Hgig_03243

MILSENILYEILNTAEWPVHPHFASASESTNDGSNGSAGAGMFGLQLASISRLTSAVTSLLTPLLPFSPHLTPQLASIVESSCSWKVSFCGASDIVAILQDTQLEIRHARQDFQEIIARTDTLYYDPFPEWRLLSWSCDGSLLAVSYSSGVVQLYTALAQLLYTIYPPRYKEGAVYSEPSAALAALVITEDQLPDPKWLWEVTCVEYSGTVRSYLVSGNEGYQNCSTFSLTSHYHHGITAATMHQSLLVVAGPSQLMNDPSLSYFGLGHGITLWRRLNHHPYYKQVTLMEDEEYECPAVSVSQRLLSWVSRPATPPNTAVCVRVSPCGRHLAALHLSGAVSVWHFPSLRKSKYWQLHDQPEAALLNTSARALREKNCIRKVGPGKKKQSCLKAGQPISLEWWCRDDDDDETGSGAEDGLVLCRSSGALTISSITTFANLLGENPEFLAGSHMICKPQKGGFLCLELERMLTKRHRSTSASATASEPYQYSDGYATDLSYQQFGEMDPMPTAEEGEGALFATLVDGATDADLEKDGGQQPVGYLAWFLVLFWHILYWLTDDQRFQVSELESVAEKYRLVWFKSSSPDQLFANKLKMQEYGEALLLAKSYDLDTDLVYMEQWRNTEPTLASISDYLSRVRNRSCVLQQCCSVVPATLLPAREMILYALRGTDIHVVASMGSGEDTGDWMSGPSLFDCEDQQQRDELQQTRDQLLKQVDWMNLSEEQRSIIRVRQRLLRYLDRLDIYEILLGGGQFAMERYNALTYAKFRDQSSIAACHQFAREGNDDAVRIMWTYHGEETLPHRLALLSTLPPTLGPFEYRALLPMCGLEDQVHDWDEGALRERDWCEDDHLVAGLQFSNPSEQVNAICSLYAAAAGVADICGGVDSVSDTGVSLATSSNKLTPQIVSKWYQLRARQLEGDCGLMDAALDLLKLGRERNVPDLARLLSSLCTLEVLVYEAGQTHMTLDELAVMEPVDVLALLMEKSEGNRSQYLKEWVLPYLSRCEAAQAGCRDVLLATYLQREATHSLVIPLVVLKLVCSYQDLLQGDALYECAVKCVYSCENTDQLDTATQLLDALPVTLNSVSLLSKVRLELWCCGVLERHGVAALPRLLLNIAQEQALQLITKLAHATSRRSSELRFTVWEELLDDMLELQQKVLPCITPQDCYQSIAEALLTSGNRKYIDYGGEFLLVNRTDASAAATAYTADGGSSATGSNPYVDGVEYTEAVRLVVEAARGYFNTAEHYRDPALELAKQCLELIQSGTEQKLDDAVQEEKDLISALEILHEFNVDKLPLQVRLCTDRVRLVMAALESSGSSCLQYWWRVMQLAQLLRVEHEDQKLREVTVLDLLARQAIKRQSPLSRVGDCTVSCMNVRGCGRVGKQDLIERMIIEKRLDICALSETKLKGKGEFMMGSIKGVKAGVGEGCHAREGVAIMLSERMWSMVRDWKAVSSRIVWVRLKCGSEKWVIVSAYGPGSEKTVEEREEFWETLSECVSKFEQSEKIVVLGDMNARVGDVEVEEVIGKFGVPGVNWAGGRMVQFCTEAGLLAGNTWFKKKRVNKYTWLTDMADRKDKALMDWVLVDKRLKGCLKDVNVLRSWGGVIGSDHFLVVAKLCWKRTRYERQEEQKVKVIRVSELLKKEKAEKYKELIEEDWRAMRSRAVGSVEEEWESFRGTIMRRSEEVCGLRTVGAGGRKSEWWCTETAVAVREKREAFALWLQRKDQESREEYKRKRRDARIIIAKNKGEANRRWGERVTSEFRESKKIFWKSVNRMRKPQEKLDEVVKDENGEILYESEQVVERWSGYFESLLNVEDDRKANLTCMGRGGATSRKMVEQREIESHEVQRAVCKLKNGKAAGEDGITNEMVRSGGLAIVEWLGKGDKKECKNYRGISLLSTPGKVYGRVLIERVSEITEVQIRDEQGGFRKGRGCVDQVFALKCVCEKYLEREKEVFVAFMDLEKAYDRVDRMAMWEVLGMYGVGGKILGAIKSMYEESTVCVRIGRKLGRKFKVDVGLRQGCVMSPWLFNIFIDGVVREVNARVLERGAALMSDTGGEWQVNQILYADDTALIADEECKLQRLVNEFGRVCERRKLSVNVAKSKVMRVTRNEKAGVIEITLNGIRMEEVNSFRYLGVDIDRDGGMKSEMKHRVTEGEKVSGVLKKMWKGGGMSRDAKRSMYEGIVVPTLLYGSEVWAASAEIRRRMGVLEMKCMRAMCGVSIWDRIRNEEVRRRCGSELSIGERMDRNVLRWYGHVERMEEERMVKRVYKSSVEGSRKVGRPKQRWMDGVKAAVERRGANIDYARMCVQDRERWRREVHSKHMWAA

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF08314	Sec39	Secretory pathway protein Sec39	Family	Interproscan
PF15492	Nbas_N	Neuroblastoma-amplified sequence, N terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR013244	Domain	Sec39 domain	Interproscan
IPR029145	Domain	Neuroblastoma-amplified sequence, N-terminal	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15922	NEUROBLASTOMA-AMPLIFIED SEQUENCE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000149	Molecular Function	SNARE binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006890	Biological Process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	Interproscan
GO:0070939	Cellular Component	Dsl1/NZR complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-