Gene detail

Detailed information of Hgig_16944 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_16944	BICOID-INTERACTING PROTEIN RELATED	Chromosome17	47601322	47880097	+

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_16944

ATGAGCACGCATGGTAGGGGTGAAGTGGTTAGGAGAGAGGGTGGTGTGTCAGGAACAGGGTTAATGATGTCATCAAAAGTGCAGCTGAGTCCTTCTGCTGGCCCTGCTCCTCTTAATTCCCGGCCCCCTCAGTCCCAGCCTCGCGCCTCCATGGCTGATGCAGAGAAGCACGTGCACTTTGTGGAGTCACAGATAAAGACAAAACACTCGCACCCTGTCAACAGGTCCACTAATGGCAACAAAAGTGGTGGTGGAGGCGGCAACAGTGTGCGCCGCAAGAGGGCAAACTCTTGCAGTTGGGGCAGTGATTACAGCAGCAACAGCGGCGGGGGCGGTGGTAACCGCAGCAAGAGGCGCCGCACGTACCATGGCGGCGTCCTGCTGCAGTCAAACTTCCTGCTGGGGGGCAACATTACTGACCCTCTTAATTTGTCCACTAATGGCAACAAAAGTGGTGGTGGAGGCGGCAACAGTGTGCGCCGCAAGAGGGCAAACTCTTGCAGTTGGGGCAGTGATTACAGCAGCAACAGCGGCGGGGGCGGTGGTAACCGCAGCAAGAGGCGCCGCACGTACCATGGCGGCGTCCTGCTGCAGTCAAACTTCCTGCTGGGGGGCAACATTACTGACCCTCTTAATTTGGGAGCCCTTGAGCCTGTTTGTATGCTGGAAAGTTTTAAATCTAATCTGAACTCTAACTCATCACCCACCAGTGAGTGTGAGCTGCAGCGAGGCAATGCTGTGCCGGTTGTCATTCCCGCAAACATCAACGACCCCTTAAACCTGGACGCTTCTTCGGATACTGAAGAGGTGGGAGTACCACCTCTGCCTCCTGTTGCTGCTTCTAGTGCTAGTGCTGCAGCTAAGCGTCTGCAGCAGTCTGTTGCTGCGGCTGTTGTCTTTGATAACACCAAGAGGAGAAGAAAAAGCAAGAGACGTAAGCGCAGGTACTCGGAACCAGGAGGTGAGAAAGACAAGCACGTGATGGATGGGCTACAACAAGAGCTCGAGACAGCTCTACAGAAGGTGAACAGCCACCAACTGAACCACTACGCAAACGACAGCACCGACGATCACAGTCACGATCATAACACATCAACTGAGTCGTTACAACACAACTCCTCAGCTGAGTCGCTGCATAAATCCAGCTCATCTGTTGAATCCTTGCACCATTACAGTCAACAGGACACTTCAGTTGAGTTCCTGCAGCAGATATTGCCCCGACAAAACTCTTCAGAAGTGTTTCAACAGCAGAAGAATAACACTTCTTCTTCAGTAGAGTCAGTCCACGCACGTAGTTCTTCATTTGAGTCTGCACTAGAACTCAACTCATCAGCTGAATCGCAGTACCAAGATAGGGTTGACCCCTCAAACTTGCCTCTCCCGAGTAACCTGAACGCCAACGTCGCTTTTAATGTAGAAACCGCCAGGAAGAACTCTGGAACATCTTTCAATGATGACAGTGTGAGAGCCAGTAGAAAAGGCTGTTATGATACTGAAGCGGATGTAAATGACAGAGGAAATGCTCTAAATATTGAAACAAGTAGAAAGCGTCTTAGAATTGATGCAGAGTTTAGTGATGAAGACTTAAATCAGGCTTCGTCTGTTGGGGGTGCTCCAGGGGGGTACCAGAAGCCTCCGAAAATGATGAAAAGCATCAGTGTTTCTGTCTTGGAAGGTCCGGTAAGCAGTTTGGATTCTACGGCTGAGGATTCTCAAGTGGAGTACGACATTGATAATGATCCTGATGGGAGGGAGGAGGACGTGGACGGCAAGTTGGACCGGTCACCCAGTAAACTTGTGGTTGTACTAGATAAAGACAAAGATAGACTTGGTTTAGAGAGCAGCTTCCCTGTGGCTGGAGATGGAAACAGCATAGCAGAAACTGTTGATGATGCTCATGCTTTTTGCAGGTCAGTTGAAGTGTTTATTCTTTTGCTTAAGCCCCTTCCCCTTAAATCATTTGAAGCATTAGTGCACAATTCTAAGGCAAACGACACTGCGGCGGCTGCATCAAGTGGCGCGTCTGCCTCCAAGCAAGCTAACATGTCTAGTCCTGTCGCCGGCCCGAGCAACCATCCTCACCACCACCACCACGGCAGGTCCGGCGGGGCGAGCTCAAAGCGACGTAGCTTTGACACCGAGCACCAGCAGCAGCAACACGATTGTTCCAACGTGAAGAAAACTTTAAAGGCGAAGCAGGAAACCAATTCTCAGCCCACCAAGTTCAACCCGAAAGCCGCGGTCTTCCAGTATGGAAACTATTCTCAGTATTATGGATACAGGAACCCTGATTTTGCTACTGATATAAGACTGACGCTGCTGAACCCTCGGTGGTTCGATGGCCGCGACGTGCTGGACATTGGCTGCAACATCGGCCACGTAACCCTCACTGTCGCACGGGACTTCAACCCGCGCTCCGTCCTCGGCATCGACATCGATAAGAAGCTCATCAAGATAGCCAGCAAGAATATTAAACACTACATCGACAAGGGAAAGGACACCATTCCTCGACAGTACGCGAAGAAAACCAAAACAAACGATGCTGGTAAATATCCTGGAAGCTTCACCACTGTGTATCACGAGACGCCGTGTGAGAAGGAAGTGAAGCAACAAACCGAGAGGAGCAAACTTTCCTTTCAACAACGACAGGAACAGAAGGATAAAAAGAAGAAAAGCAAGAAACCTTTTCCATACAACGTAACTTTCACCTCGACTAACTACGTTCCTGAATGCGCGGAGATGCTAGAGATGGTTAAGCCGGAGTACGGTGTGGTCCTGTGCCTGTCCGTCACGAAGTGGGTGCACCTCAACTGGGGGGACTATGGGCTGCAGCTCTTCTTCAAGAGGATTTACCGTAACCTCAAACCGGGGGGCAGACTGGTATTGGAAGCACAACCATGGGCTTCTTATAGCAAGAGGAAGAAACTAACGCCACGTATTTTGCACAACTACAACAACATCAGGCTGAGGCCAGTCATGTTTGAGGAGTACTTACTGCGAGAGGTTGGCTTCGTTGACTGTCATCACGTGGCCACTCCTGAACACGCTTCCAGAGGCTTCCAGCGACCCATACAGGTGTACACTAAAGAAGGTGACCCCAATTCCGGGCTTCAGAATGCAGAGTACGCCGATTATGACCAAGACGAGCCACTGACGAGATTCCGCATTCGTCCATCCTACATGGTGTCTCCCAACTACCCATCGTACTGGGCCTCCCCTTCCATGTTGCTACAGCAACAGTCTCCTTCATCAGAAGACCACCACCAGGCCGACGTCGACACTCCCAGCTGCCACTCCTTTGCTTTGGGCGTAAGGGTGCCCAGTGCTCCTCAGCACTCCAGCTTCAGTTACCCGTACGTCTTCACAGGCTGTGCTGACCCTTTCGCCCCATCTTCGTCTACTTGCCCTGATGAGTCGCCCCATCCTTCCTACCCGGATATTTATCCAACATATCAGCCGTCTGCCTCACCTCTACCTTCCACTTTACACGTTTCACCTCACTCCTCAACTTCACCTCATCAGTACTACGATGGGAGAAGAGCAGCTCCATCACCACTCAACTATGCTCCATCACCACTCAACTATGCTCCATCACCACTCAACTATGCTCCATCACCACTCAACTATGCTCCATCACCACCCAGCTATGCCCCATCACCACCTAGCTATGCCCCATCCCCATATAATCCTGGAACACCAAATTATTCTCCTCATGTCCCAACCTCACCAAATTATTCTCTGAACAATTCTCCTCGTTCGCCAATCTATTCTCCAAGTTCACCATCTTATTATCCAAGATCTCCAAGTTCCGTTCCATGTTATTCCCCAGCAGCCTCTCCTGACACGTCTGCTAATCCAAGTTATTCAGCATCACCTCGAATTTCTTCTTCATCTGTACTCTCGACATCTCGCGATCACAATCCTTCAAGAGTGCCGAATGAGTCTCCAAATCCTGGTGCATCACCCGATCCTTCACGAAACGAATCTAATTCTAGGAATTCCCCACTCGTATCATCCCCAAATGCTTCACCTTCGCCAAATAATTCCGCCTCACCGAACCATTCAATGTCCCCTCAGGCTTTTCAACCACCAAATTATTCGGCCTCTCCTTCCGTTTCCTCAACTCCGTCCCACTCTCCTTATCCCTCGCATTCACCACATTCAATGCCGTCCCCGTATTATTTTGCTTCTCCCCATCCATCGGCTTCTCCTCACCCAGCTGCTTCTCCTCATTCCATGCCATCTCCCCATCCTTCTGCTTCTCTCCCTTCCCATTCTTTCGCTTCTCCTCACCCATCTTCCTCTCCCCAACCCTCCACTTCTACAGGCTCCAATTTACATCGTAATTCGGGCACTGTTTACCAGGCGTCGTCAACACACGTGGGGCCTCCTTCGGCCTCCCCTCAGTCGTCTGCATCCCCCAGGCCAGCTGCCTCTCCGTATCAGTCTTCTGTATCACCAAATACAACTTCTGCCTCTCCGCATCCATCAGCAGCTTCCCCGTATCCGTCTGCTTCTCCACATCCATCTTCTCTGTCTCCATACCCATCCTCCGCCTCTCCGCAACAGTCACATCACCTCTATTCTGCGGCTCCTTTCTCAAGCATGTCACCACATCCTTCTCTGTCACCCAACCCCTGCTTTCCTTCATCACATCCGAGTGTTTCTCCACACCTCAATGCTTCTCCACACCCCGATGCGTCTCCACACCTCGGTGCTTCTCCACTTGCCGGTGCTTCTCCACACCCCAATGCTTCTCCACACCCCGATGCTTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACACCCCGATGCGTCTCCACATCGCAGTAAATCTCCACACCGCAGTGCTTCTCTCTCCAGTACTAGCTCATCGTGTTCCTCTAATTTTAACTTGTCAGCAATTTATTCCGACACCGCAATGTGTCCGCCTTCAATGCCTAGTGCTGCTCAATGTTGCCCTGCTCCTGCTATGCCTTCCAGCAGAGATGACCATTATCAAACCAACTCTTCTCTGGAATCTGGTGTACCTATTCTTAATGTTGATGATTTGAGGAACTACACAAATGAAGCCGTCGTTGGGAAGCTTAACAATACTGTAGAATGTGCCGTCTTAGAAGAAAGTGTTGGTGTGACACTTGTCGTAGATGAAGAAATGAGCACAGCTTCGGCAGATTGTGAACATTCGGTTGAAGGCATTAGTGACGTAGAGTCTAATATAGGGAGTACTGTAGGAAGAATACAATATTATAATATGTCTAATGTGGTGTTAGCGTGTGAAGACCAGAAAACTAGTGGTACATGTGATGATTCTGATCATATTGAAGAAAATTGCGGAACAGAAGGGACTCGTTTTATTGCTGAATTGCCTGATGAGAGTGGTCGGAGGCAAGAAATAATTCAAAATGAACGATGTGAAGATAGCGGTGCTAATCAGGACGAAGGGGACTTGTCTTCTGGACTATGTGAGGAAATTGTAGCGGAAAATAGAAATGAAGAAATTGTTGGTGATAATAGGGCTATTGAAGAAAGTTTAGTTGAAAATAGAACCGAAGAAAGTTTAGTGGAAAACAGAACTGAAGAAAGTTTAGTGGAAAACAGAACTGAAGAAAGTCCTGTGGAAAACAGAACTGAAGAAAGTCCAGTAGAAAACAGAACTGAAGAAAGTCCAGTAGAAAACAGAACTGAAGAAAGTCCAGTAGAAAACAGAACTGAAGAAAGTCCAGTAGAAAACAGAACTGAAGAAAGTTCAGTGGAAACTAGAACTGAAGAAAGTTTAGTTGAAAATATAACTGAAGAAAGTATAGTGGAAAATAGAACTGAAGAAAGTATAGTGGAAAGTAGAACTGAAGAAAGTATAGTGGAAAGTAGAACTGAAGAAGGTTTAGTTGAAAATATAACTGAAGAAAGTTTAGCGGGAAATAGAACCGATGACATTGTTACTGATGGTAGAGTTATTGCAGAAGTTTTTTCATCTAACCTCGATGAGTCTTCTATTGATTGTCGAGACGTTGCAGTTTTGTATTCAGTTGGTGGTGATGATAATGTTGCCGCCAGTTCAGCAACACCTATGTTAAGTTATTCAAGTGAAGCAGGAGCGGACATACAAGAGTTATCGAGTGCTCGGTTCGAACAACCTAACACTCAAAACAACGTTCTGCCTAGTGCTATTCTAGGCGATAACCCATACTTTGGCGCTGAAGAAGAAAATGAACTAATGTTAGGATCAGCCGTTTTGACCCAGAATGACGTGAGTGAAGGGCATATTTCTAGTGAAGATGGATTTCCATTAAATGTAGCTGAAGGACATGGTGCTAGAAGAGATGAAGTTACTGGTGAAGAAAGCTTTACTTCAAATGCAGAAATAGACCTTGATTTAGAATAG

Transcript

Hgig_16944

Protein

Hgig_16944

MSTHGRGEVVRREGGVSGTGLMMSSKVQLSPSAGPAPLNSRPPQSQPRASMADAEKHVHFVESQIKTKHSHPVNRSTNGNKSGGGGGNSVRRKRANSCSWGSDYSSNSGGGGGNRSKRRRTYHGGVLLQSNFLLGGNITDPLNLSTNGNKSGGGGGNSVRRKRANSCSWGSDYSSNSGGGGGNRSKRRRTYHGGVLLQSNFLLGGNITDPLNLGALEPVCMLESFKSNLNSNSSPTSECELQRGNAVPVVIPANINDPLNLDASSDTEEVGVPPLPPVAASSASAAAKRLQQSVAAAVVFDNTKRRRKSKRRKRRYSEPGGEKDKHVMDGLQQELETALQKVNSHQLNHYANDSTDDHSHDHNTSTESLQHNSSAESLHKSSSSVESLHHYSQQDTSVEFLQQILPRQNSSEVFQQQKNNTSSSVESVHARSSSFESALELNSSAESQYQDRVDPSNLPLPSNLNANVAFNVETARKNSGTSFNDDSVRASRKGCYDTEADVNDRGNALNIETSRKRLRIDAEFSDEDLNQASSVGGAPGGYQKPPKMMKSISVSVLEGPVSSLDSTAEDSQVEYDIDNDPDGREEDVDGKLDRSPSKLVVVLDKDKDRLGLESSFPVAGDGNSIAETVDDAHAFCRSVEVFILLLKPLPLKSFEALVHNSKANDTAAAASSGASASKQANMSSPVAGPSNHPHHHHHGRSGGASSKRRSFDTEHQQQQHDCSNVKKTLKAKQETNSQPTKFNPKAAVFQYGNYSQYYGYRNPDFATDIRLTLLNPRWFDGRDVLDIGCNIGHVTLTVARDFNPRSVLGIDIDKKLIKIASKNIKHYIDKGKDTIPRQYAKKTKTNDAGKYPGSFTTVYHETPCEKEVKQQTERSKLSFQQRQEQKDKKKKSKKPFPYNVTFTSTNYVPECAEMLEMVKPEYGVVLCLSVTKWVHLNWGDYGLQLFFKRIYRNLKPGGRLVLEAQPWASYSKRKKLTPRILHNYNNIRLRPVMFEEYLLREVGFVDCHHVATPEHASRGFQRPIQVYTKEGDPNSGLQNAEYADYDQDEPLTRFRIRPSYMVSPNYPSYWASPSMLLQQQSPSSEDHHQADVDTPSCHSFALGVRVPSAPQHSSFSYPYVFTGCADPFAPSSSTCPDESPHPSYPDIYPTYQPSASPLPSTLHVSPHSSTSPHQYYDGRRAAPSPLNYAPSPLNYAPSPLNYAPSPLNYAPSPPSYAPSPPSYAPSPYNPGTPNYSPHVPTSPNYSLNNSPRSPIYSPSSPSYYPRSPSSVPCYSPAASPDTSANPSYSASPRISSSSVLSTSRDHNPSRVPNESPNPGASPDPSRNESNSRNSPLVSSPNASPSPNNSASPNHSMSPQAFQPPNYSASPSVSSTPSHSPYPSHSPHSMPSPYYFASPHPSASPHPAASPHSMPSPHPSASLPSHSFASPHPSSSPQPSTSTGSNLHRNSGTVYQASSTHVGPPSASPQSSASPRPAASPYQSSVSPNTTSASPHPSAASPYPSASPHPSSLSPYPSSASPQQSHHLYSAAPFSSMSPHPSLSPNPCFPSSHPSVSPHLNASPHPDASPHLGASPLAGASPHPNASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHPDASPHRSKSPHRSASLSSTSSSCSSNFNLSAIYSDTAMCPPSMPSAAQCCPAPAMPSSRDDHYQTNSSLESGVPILNVDDLRNYTNEAVVGKLNNTVECAVLEESVGVTLVVDEEMSTASADCEHSVEGISDVESNIGSTVGRIQYYNMSNVVLACEDQKTSGTCDDSDHIEENCGTEGTRFIAELPDESGRRQEIIQNERCEDSGANQDEGDLSSGLCEEIVAENRNEEIVGDNRAIEESLVENRTEESLVENRTEESLVENRTEESPVENRTEESPVENRTEESPVENRTEESPVENRTEESPVENRTEESSVETRTEESLVENITEESIVENRTEESIVESRTEESIVESRTEEGLVENITEESLAGNRTDDIVTDGRVIAEVFSSNLDESSIDCRDVAVLYSVGGDDNVAASSATPMLSYSSEAGADIQELSSARFEQPNTQNNVLPSAILGDNPYFGAEEENELMLGSAVLTQNDVSEGHISSEDGFPLNVAEGHGARRDEVTGEESFTSNAEIDLDLE

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06859	Bin3	Bicoid-interacting protein 3 (Bin3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000684	Repeat	RNA polymerase II, heptapeptide repeat, eukaryotic	Interproscan
IPR010675	Domain	RNA methyltransferase bin3, C-terminal	Interproscan
IPR024160	Domain	Bin3-type S-adenosyl-L-methionine binding domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR039772	Family	RNA methyltransferase Bin3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12315	BICOID-INTERACTING PROTEIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008171	Molecular Function	O-methyltransferase activity	Interproscan
GO:0008173	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0017069	Molecular Function	snRNA binding	Interproscan
GO:0040031	Biological Process	snRNA modification	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-