Gene detail

Detailed information of Hgig_18290 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_18290	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Chromosome19	77784369	77827105	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Hgig_18290

AGGACATGATGCCGAACTATCTATCGTTCATCCGTGGTGTGGTTGACTCTGACGACCTGCCCCTGAACGTGTCCCGAGAGATGCTCCAGCAACACAAGCTCCTAAAGGTCATCAAGAAGAAGCTCGTGCGCAAGGCGCTGGACATGTTCAAGAAAATGGAGGAGGAGGACTTCGAGAAATTCTGGAAGGAATACTCTACCAACATCAAGCTCGGAGTTATTGAGGATACTAGCAACAGGAACAGACTCGCCAAGCTCTTGAGGTTCACCAGCTCTACCACTGGAGACGATAAGAAGACCAGCTTGGCAGATTATGTGGAGAGGATGAAGGATGGACAGGAGACTATCTTCTACATTGCCGGTTCTTCTAAGGAAGAGGTTCGTTCGTCTCCATTTGTCGAGCGCTTGCTGGTGAAGGGCTACGAAGTGTTGTATCTCACTGAAGCCATTGACGAGTACTCTATCAACGCAATCCCTGAGTTCGAGGGCAAGAAGTTCCAGAACGTTGCCAAGGAGGGTCTCACCCTGTCTGAGGGCGAGGCAGCTAAGGAACATGTAGAGGAGCTAAAGACTAAATTTGAGCCTCTAACAAAGTGGTTGGCAGAAGAAGCTCTCAAGGATCAGATCGCAAAGGCGGAGGTGAGTGAGAGGCTGTCGTCTTCACCGTGCGCGTTGGTGTCATCGCGCTTCGGCTGGACCGCTAACATGGAGCGCATCGTCACCGCGCAGACGCACAGCAAGACTAACGATGCACAGAGAGATTATTACCTGAACCAGAAGAAGACACTGGAGATTAACCCCCGTCACCCCATCATGAAGGAGCTGCTCAGAAGAGTAGATGCTGGCACGGCTGATGAAGCTGCTATTGATATTGCCAAGATGATGTTCAGAACAGCTACCCTACGATCAGGCTTCATGTTGAAGGACACCGTAGAATTCGCTGCTTCTGTTGAAGAGATGCTTCGCGCCACTCTCGGCATCGCTGCTGATGAGCCTATCGAGGAGGAGCCCGAGCTTCCAGAAGACGAGCCTGTACAAGAAGAAGAAGAGGAGGTCGAAGCAGAACACGACGATGCTAATGCAGAAGAGATGCACGACGAGTTGTAGAGCTTCAGAGACCAATATTTTTCATGTACTTTGCGTACCTGTCCGTAGTACTTGTATCGTATGAGATTATTATGCCTTTCGAGGCAACACTTAAGAAAATACCTACGTGAATTCACGTCCTCTCACTTAAGATAATAACCATAGCGTGTACAATGTCGTCAATACATTTCAGTCGCTAAGGTAATGATACTAGTGGAAGGAGTTAACAGTGGTATGTATTTAGGGATATAATTGCATAGTACATGAACTAAACTTAACCAATCCTATTGTGAAGTTTGTTTACAGGCTGCAGTTATATTTCGAACGACTGTTATATATCAAAGAAAATTCAAGAACTCCTTAATAACGATAAAGTTGTAAATATATATGTAAAGTTTTTCAAATTCAATTGATATTAGTAATCATGCAACTGATGGAAAGTACATTTCAGTAATGCATAAAATTTCGCTAGTTTAATCCCACAGAAAATTTGACATTTTGTATTTACTTGAATAGATCATAGTATTTATTTTGTCTGCCAAATTTAACTATATTTTGAGTAATTCTGTTACCAGATATACTGTTTAATTAATGTAGGAAAATTACCACGATTTTCGGAGAAATTATATATGGCAAAGCCTAAAAGTAATGTGCTTTTATCAGATTATTCGAATTCGTCGTTGAAGCGTATGATCAAAACTGTTGCAGACAAATCGTAGGTTTAATTTATTAATTTGCAATTTTTGTTACTGTTCGTGGGGAATTACTTTAACTTTGGGCATTAAAATGAATGTACCTAGCTATTATTTATTGAATGTTTATTGGTCGGTATTAAGGTAACTGCATAATTCGAATGGTTTGTTTTAAACATGGAAGCTGGACTTGATGTTCGGACATAGTTCAGATTGTTTAAACTTAGCGTTGCAACGAAGCTCAATTACCAGTTTTGAGACGAATAGCATCGAGAGTTGTGTTAAAAGTTAGGGTATCATTTTCGTGTACACCGGTGGTTCTTAGTCTTTTGCTGTCCGCACTCCTTAAAGACCAATGAGCCGTTTTTGCGCAAGCATTTCCTTGGTAATGTAGGAATGTATATATTAAAGGGTTACATTTAATTATATCTGCTTTAAAATGCTGGTACCCTAGGGGTGCGGGTACCCTAGGTCAAGAACCGATGGTGGACACCGTGTGAGTGAGCCATTATTTAGTGTGTGGTCTGCTATACCAGTGAATAAATCTCGCTGTATTGAGTTTCTCCAATATTTGTTTTCAGTTCCATGAATCCAGTTGAAGAAAGAATTTACTTGACTGTACATGCACTGGTTTATTGTGTTTGAATAACTCGTACCAGCCCTCTTGTTTAACGTCTGACTATAAACCATATATAACGACTGTTAATGTAAGAGATAAGATTCCCGAGTACTGCAACTTAACTTTGTTAGATGGTTCTCTGAGTAACCTCTGCAAATGAATAGACCATCTTGTTCATGGTGTTTATACTTCTGCAATATTGTTTTAATGTAAAAGATAATGGATTCCTGGAGCACTGCCGTTCTTAGCGGTTCTCAAAGTAACCCCTGCACTTGGGTACACAAAACTGCATCATTGCCCCACCATTATCAACGGCAACAATAAGCCAAATTTTCAGTATTACAGTGTGTTGCCTGGGCCTGCAGATCAGTACGTACTCCTAGGGTTGTCTGACATTTTTTTATTGCACGACAGTTTGCAAAATTACCTCGTGGTCGTCCTAGAGGTTCAACGTCACAATCTCGGCGAGTGTTAGTGTGTTGCTGTGTGTTTCACTTGTGTATCATCTTGCGTAATTATAAAATTGGATCATCAAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00183	HSP90	Hsp90 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001404	Family	Heat shock protein Hsp90 family	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR037196	Homologous_superfamily	HSP90, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11528	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0048471	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-