Gene detail

Detailed information of Hgig_24836 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_24836	MULTIPLE PDZ DOMAIN PROTEIN	Chromosome27	203421685	203472519	-

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_24836

ATGTCGTTGAAAAGGACTGCACACGAGTTCATCCCACCTACAGTTGTCAACACTCCTCACCGACTGCTCACCAAACCCTTCGAAAAGGGTTGCAAAACATCAGTTGAGCATAAAGATGAGAACAGAGTTACTGGGCCCTTCATCAGATGGCCTGCCAGACGGACGATCACCGACAAGACTCGCGAGGAAATAATTTATCTGCTGCAAAATGGCAAGATATTTGCTGCCATTTCTGAGGAAATCGGATTCAGCAATAGCGTGATATTTCGTATTTTGAAGAACAACTCGGAAAAACATTCAGTTACCAAGAAGAAGCCGCCGAGTCGTCTTAGGAAAACTACTAAGACGGAAGACAGGTTGCTCTATCGGCGTTCGATGGGAGTCAGATTCAATACTGCCTCTGCGATTGCTCATAAATTGAACAAGAACCGGCAGCTTCCCATCTCCAGGCATACAGTGGCAAGGGGTCTAAATGAAGCGGGACTGAAAGCTCGTTCCCCAGCCGTGAAACTCATAATTTCTGTAAGGAACCGTAAGACTCGTTTGACGTTCGCTGAAGAGCACGTCGTTTGGAGTCAGCTTAAGTGGTCTAGAGTGTTTTTCAGAGACGAAAGCAGGTTCAATCTAGTGGGTTCTGATGGTAAACAATATGTCCGACGGAAAACGGGGAAAGATTGGATCGAAGAAGATCTCATCGGCCAGTACAGAACAATGATTAGGGAAATATATAAGAAACCGAACTCAGCAATCATAACCAGCATACTGCCCAGGAAGAATATATCCAACTGCGTCAGCAGCAGGATACAATATAATAACAAAGCTGTGTCAAAGATAGCTGTAGAAGAAGTGCTCCAATACCTGGACCTCACAAACGAGTTCAACCACGGCAACCTTTACTCGCAAATGGTCTACACCTCAGTTTCTATGGTAAAACGGTGCGTGGTCGTGCAGGAAGTGTTCCCGGATGGGCTGGCAGCTCAAGATGGACGGCTGCAGTCCGGAGACCAAATCATCGAGGTGGACGGTGTCGACATGACGGCAGCGACCCATGCACATGTGTGTCAAGAGCTCAGGAGGTTCCCACAACACACGCTAAGACTCGGTGTTTACAGGGAGAGAATACAGGCCTACAAGCCCACGCCACAAGTCAATCACCAGCCGCTGCACTCTGTTTATAATGATGACTGCGCAAGTGTCACTCTGTGGAGAGAAAGAGACCGGCCCCTCGGCATCAAGCTCGGAGGACATCGAAGTCAGCCGGGCATCTTTGTTTACGAAATATTACCCAATTCTGTGGCTGCGCTCGATTCTCGGCTGCGCTTACACGATAAAATATTAGCTATCAACGGACACGACGTACGATACACAAGAATTGACATGGCTTCTAGACTTATAGAACGAAGTAGGTCATCGGTCACATTAAGTATAGCAGCAAACAACCACAACAACAATAATAATAGATCTAGTTCTGTTGACGGTACAAGTTTATGTTCCAATAATAGCGAATCATTTAGTGAACACTCTTCAAACAATTCATCCCCACGAATATATTTACCAACAACGACGATCTCAACCGAATCAACGTCATACCTTCCAGAAACATCTTCAACGGAGACATACCAATCCTCAGTCGTACAACCATCCTCATGTTATAATGGGTTACAATCTTCATCGACTCCTCCTTTATCTGTTTACCCTAGCAGTGATGTATCGTGTACAGACACTGATGACTCAGAGAGCACGCAATCTGCTGCGTCAGCAAATGGCCGCCTTGTTCTGGATAGAGCTGAGTCACCACACAATGGTCAACAATGGAGGGAGTCTGGGCGAGAGGAGTGCGGTGTCCCTGCAGACACACACGATGATAGATGGCCTCCCTTACCCGACAAACCCAGACTGGCTCAGAAAACAGCATTTATTAAAAAAGCAAGCAACGAGAGCCTGGGCATGCGCATTGGTGGCGGGGTGGCGAGCAACGAAGGAGACACACCCATTTATATCGTCTACATTAACGGCAACGGTCCAGTCGGGAAGTGCAGTAAAGTAAAGAAGGGCGATGTTTTACTGTCTGTAAACGGGCAGTCCCTGTTGGGCTTGACTCACTGCCAGGCAGTGGCGCAGTTGAAAGCAACAGCAGAACTGGCTGGAGTTACTCTCAACTTGCTGGACGGACCCGAAACTTCTAACACAGGCAACGCAAACTTCGTCCCATCGTGGCTCTACTGGCAGAAACTACCGCGTCCTCTCCAGATCTCACGAAGCATTGTTCTGCAAAGAGCCCCGGGATCTTCGTTAGGTTTTAGCATCGTTGGAGGAACGGATCCTTCCCGAGGATCTGAACCAATCCACGTTCTTCTAGTTGTGGCGTCGTCACCAGCGGCTGTTGATGGGAAGCTTAGATGTGGGGACAGGATACTGGCCGTTGACAACTATTCCCTTGAGAGCGTGTCCCACTCCACAGCTGTCGGGTTACTCAAGCAGGCGGGGCAGAAGGTGCACCTCGAAGTCGTGTCGTGGCTGGGCACCGAACTATGA

Transcript

Hgig_24836

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR051342	Family	PDZ domain-containing scaffold protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19964	MULTIPLE PDZ DOMAIN PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-