Gene detail

Detailed information of Hgig_26890 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_26890	YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP	Chromosome30	118386853	118404983	-

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_26890

ATGGACATAACAAAACAGCTGAATATGTGCCGTAAAACTGTGTTCAATACCTGGAAACGATACATGGAGGATGGCACAACCTCTGGTAAGCCACACACTGGTAGGAAACGATCAATCCGTACCAAACAAATCCTTCAAACCGTGAAGAAGCGAATCAACCGGAATCCCAACAGGAGTGGAATAAAAACTGCGAAAGATCTCAATATTTCGAAATCTTCAATGCAGAGGATTCTTAAAGATGATTTAAAATCGACTGCATTCAAAAAACAATCCCGACAGCTAATTTCATCAGCTACCAAGGCTAAACGGTTCTACAGGAGCAAATTCATGTTGGAGGAGATGAGGCGCGCCACTGACAAGGTTTTCATCTGGACCGATGAGAAACTCTTCACCGTGAAGGCTGTTAGTAACAGGCAGAATGACAGGGTTTATGCACATCGTGCAGGAGATCTGCCCGAAGGCTGCAGACTTAATCTCCGCCGTCAGAAGCCAGCTTCAGTCATGGCGTGGGCCGGAGTTGCATCTGACGGGTCCAAGTCCCCCTTCATCTTTATCGATGCTGGCGTCAAGATCAACAGCAAAGTTTATTTGAACATGTTGAGTGAAAAAGGTGTTGCCCTGGGTCACAGCAACCTTCGATCTGAAGAGCGCCTTTTTGTCGTCATGGCTTGCAATCAGTCTGAGGAATTGGACGCCATCTTTGGGGGAAGTGTATCACTGAGACCCCCTTACGGCCGTCGAGTAAACCAACTCACCATTGAACTGCTGACAGAAATACCGCATATTCTTCCTGTGGCTGTTGCTGGAGTTGCCCCTTGGACTCTCCCAGACATAAAAGTATGCACGGGCATGACTCATCACGTCAGAGGAGACGCCCCGTCGGGTGCCTTGCGCGCATTCTTCCTAGAACACCAACAGACTCACACCGAACTCAGTGCTATCATCTCAACTCTCGAAAATATTCTCGACCAACCGCAAACGAACTACATTATCTACTCAGATTCTCGCAGCTCCCTGCAGGCGCTGCAGCATATATATAGTGACCAACCGCTGATCCAGAAAGCTCACCAACTACTTCACGTGCTGCACTTTGAGCGTAGTTGTGACGTGGAATTCTGCTGGGTTCCAGCTCACGTCGGAGTGTCTGGGAACGAGACGGCCGATTGTGAGGCTAAAGAAGCGTCAGAGCATGACATCTTAGCACAAGACACTCGTATCCCACACAGAGACTACTACCCCGCTATATCCTCAGCCATCCGGAGCAAGTGGCAGACGAGGTGGCAATTGCAGATTGGCAACAAGCTTGTAGATATCAAGAACACCGTGCAGCCATGGGAAACATCATACCGCCGATGCAGAAGGGAAGAGGTCATTCTCACCAGGCTGCGCATTGGGCATACGCGAATGACACACGAGTTCCTATTGAAGGGCGAAGAACCACCTCTATGTGCTGATTGTGATGAAGCCCAGACGGTGTACCATATCTTGGTTGAGTGCCATGCGTACGACGCCATCCGTAGAAGAGTTTTCGATCCCGGAGGAGACCAACCCAGGGCCTTCACTCTCAGTAACATGCTGGGAGATGAAAGTGCAACCATCGTGAAGTTGATGCATCGTGACCCGAGCAACAGCATCATCCAGGAGCAACCTCCCTTGAAGAGTGACGGCGAGCAACCGGCTGCCGGTGATGTGGTTGCCATAGCCGACCTGCTGGTGATGCCCGGCAGGTTCCTGCGGCCACCCAAGCTCTCCATTGTGTTACGGGGGCTGCCCGGAGCTGGGAAGAGCACCATGGCTAAGATGATTAAGGACCGAGAGGTGGAGAATGGGGGCAGCGCCCCACGCATCCTGTGCCTGGACGACTACTTCATGGTGGAGAGCGAGAAGATGGAGGTGGAGAGGGACACGGGCCGCAAGACAAAGATTAAGATAATGGAGTACGAGTACGACGAGAAGTTGGAGGAGAGGTACCGGCAGTCTCTGGTGCGCTCCTACAAGAAGCAGGTGGATGATGGCTTCTTCCCCTTCATCATCCTGGACTGTGTCAACGACAAGTACTCGCACTACAAGGAGATCGTAGACTACTCCAATCAGAACGGCTTTCATGTGTACGTGGGCGACATCGACTCGGGTGATGTGGTGGAGTGTCAACAGCGCAGCACACACAAGAGGCCCCTTACACACGTGAAGAAGCTGTTTGATGGCTGGGAGGCAACTCCTAGACACCTCACCAGGGTCGACCTCACAGTCATGGCTCAGGACATGCAGATACAGGAGGTTGAGATGGAAGACGCTGTTGAGGACAACAGGTCACCTCCTCTGGTCCCGGTGGAGAGCATCCCTAAGGGCATCTCGGGCGTCGCTGGGATCCTCTCCGCTTACGCCAACCGCAAGAACGGCAACAGTAAGGGAGGACCTACCTCCTCATCCTCGTCTGCCACACCAACCCCCACTGTTCCTAGTTCCGCCGGCAGGGGTAAAGATCCACCAGTCAAGGATATAGATCACCCCGGCAAGGGTAAAGATGTTAACCCAGAAGAGAAAACAACCAGCAATGGAAACGCTGATGAGAATGTAGAAACCTCGCCAGGGAAGGACTCTAAAGAGGAGGATGATGACGACTCTAATGATGCTTACAAGATTGCTAGACTCAACAACCACCACCAACCACGACTCCACCGCATGGTTACAGTAGCAGCCGATTACTCCGAGGAAAAAACCTGCGATACTTATTTCAGTCAAGCGTCTGGAATCTTTGACAGCTAA

Transcript

Hgig_26890

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00075	RNase_H	RNase H	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR026314	Family	YLP motif-containing protein 1	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13413	YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0032204	Biological Process	regulation of telomere maintenance	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-