Gene detail

Detailed information of KAG7263022.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7263022.1	SH3 MULTIPLE DOMAIN	PIJE02001211.1	106474	145438	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7263022.1

ATGCCTGTCCCCGCCGGATCCCCGCACCTCCTGCTCCTCCTCCGTTCCCCGGCCGCCGCGGCCTCCGCAGCCTCCGCAGCCTCGGCCTCGCTTAGCGGCCCGCCGCCGCCGATCAACAGCCGCCAGCCGGGCGCCCACGTAACGACGGAGGATTCCTTCCTGTGTGGCTACCTGAAGATAAAGGGGCTGACAGAGGAATACCCGACCCTGACCACGTTCTTCGCCGGGGAGATCATCAGCAGGAAGCGTCCGTTCCTGACCCGGAAGTGGGATGCGGACGAGGACGTGGACCGGAAACACTGGGGAAAGTTCCAGGCCTTCTACCAGTACGCAAAGAACTTCAACTCTGATGAGTTTGACTACGAGGAGCTGAAGAACTCTGACTTCATCTTCATGAGGTGGAAGGAGCAGTTCTTGGTCCCGGACCATACCATCAAGGACATCAGTGGAGCGTCCTTCGCTGGGTTCTACTACATCTGCTTCCAGAAGTCCACGGCCACTATCGAGGGTTACTACTATCACCGGAGCTCTGAATGTGCAGCAGGCAGCACAGAGCAGCTTCTCATCTCCTCACCTCATCACCTCCTCACCTCCTCAGCTCATCACCTCCTCACCTCCTCACCTCATCAGCTCATCACCTCCTCACCTCCTCAGCTCATCACCTCCTCACATTCTCATCTTGTCAACGGCGTCCACCCGGCGACCTCCACGTCCACCAGGCGACGTCCACGTCCATCAGGCGACCTCCACTTCCATCAGGCAACCTCCACGATGGTCAACCAACCACGACATGTCATCCGCTCTCGGGTCATCGGGGTGATGATCAGACTGACGGCCAAACTGAAGATGTACATCGTGTCTGTTCTATGGTCTGATGAGAGTGAAGTGATCATCTATAGATCCTTCCAGGAATTTAAAAAGTTCCATGGACATCTGAAGAAGAGGTTTCCGCACTTCAACCCTCTGAAGAAGAGTGAGAGAGTGATCCCTAAGTTCAGAGGCCGCGCCATCAAAAGCAAACTGCAGCAGAACGGCTCCAGGAAGTCCGTCCATCGGATGATATTCCTCGACGACTACTGCTCCGAGCTGATGACCTGCGACCCCTCCGTCTGCCTGAGTTCAGAGGTCACGGTGTTCTTCACCTGCAAAGATCATGACCTGCAGACAGACTTCACCAAGAACAGCATCATGGTTCTGCCGTCCGGGGACCTCTCCAGCTGGCAGGGCGGTGGCGGCGTCACCAGGGAGACCGTGGGCAGCGTCACAAGGCCTTTTGTGATGCAGACGTACCGCTGCGTGGCCCCGTACGACACCAAGGACACCAAGAACCGGCCCTTCAGCGTGTGCCAGAACGAGGCCCTGGAGAAGGAAGACCGACGGCTGGCCTGGTTCCCAGCTCCGTACCTGAAGGCCTTTCAGGAGGACGCCCACGAGGACGAAGACGAGGAAACCTTGGAGGACGCTCTGCTGGAAGGGAACGCAGTGTACCGCGCCGTGCGCTCCTACACCAGCCAGAAGCCAGACGAGGTGTCCGTGCCCATCGGCTCCGCAGTGAGCGTCCTGCGGATGTCTCAGGACGGCTGGTGGCTCATCAGCTTCAACGGCAGGGCGGGCTACATCCCCTCCATGTACCTGAAGCTGTGCAGTGACCCCCAGGCCTGCCTGCACCGCCTGCAGAGGAAGGTGCACTCCTCCACCCTCAACCTGGCCTCCCTGGCTCCGCCCAGCCTCTCAGAGCTGGAGGGAGGCAGCATGGGTCAGAGGTCAGGCGGGCGGCTCCACAAAGCGCGCTCGCTGGACGTGCTGACGGAGGCGGAGCGGCCCGGGGGCCCCGACACCAGACGATACAGCGCCTCCACGGGCGAGGGGGGCGGCCGCGGCGAGGCCCCGCCCCCTCGCCGCCTGCAAGGGGACTCCAGCACCTCTGTGCTCAGCGGCTGGAGCTCCGCCTCCAGCAGCAGCAGCAGCATCTCCCGCTCCTCCGGCTCCGCCCCTGCGGTCCCCCCGAGACCCCGGGCCCAGGAGATCCTGAGCCGATGCAGCACGATGACCCGCAAGGCGGCGCTGGGCTCCAGGGCCCGGCTGCTGGGGCAGCCGGGCCCTACACATGTTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan
PF08944	p47_phox_C	NADPH oxidase subunit p47Phox, C terminal domain	Disordered	Interproscan
PF09783	Vac_ImportDeg	Vacuolar import and degradation protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR015039	Domain	Neutrophil cytosol factor 1, C-terminal	Interproscan
IPR018618	Family	Vacuolar import/degradation protein Vid24	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR051228	Family	NADPH Oxidase and PX Domain-Containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15706	SH3 MULTIPLE DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016176	Molecular Function	superoxide-generating NADPH oxidase activator activity	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0042554	Biological Process	superoxide anion generation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-