Gene detail

Detailed information of KAG7263095.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7263095.1	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	PIJE02001202.1	135661	159146	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7263095.1

TGGCTGAGGAAACAGTTTGACTCCACGGACCGGAGCCGCGAGGGCAGTATTACTGTTAAGGATGTGAAGACTCTGTTGCCCCAGATCAACTTCAGAGTGCCCAGCATGCGTTTCCTGAAGGACAAGCTGCAGGAAGTGGAGGCCAGGAGCGATCTGTCGTACCCCAACTTTGCACAGCTCTACAGGACCCTGATGTTCGACGCACAGAGAAGTATCATAGAACAGCTGGACCTGTCCTTCCCTCTGCGGAATGTGGACCGTCCAGAACTCTGCCAGATCTCTCTCTACGACTTCCAGAAGTTTCTCCAGCTGGACCAGAAGTTCCTGACGTTCCTGTTCTCCAAGGAGAACTCCATGTTGGACTGCTGGGACGGCCCTGACGACCTGCCAATCATCTACCACGGCCACACCCTCACCTCCAAGATCAAGTTCCTGGACGTCCTCCACACCATCAAAGAGCACGCCTTCGTCACCTCCGAGTACCCGGTGATCCTGTCCATCGAGGACCACTGCAGCGTGGTGCAGCAGAGGAACATGGCCACGCACTTCAGGAAGGTGTTCGGGGACCTGCTGCTCACCAAGCCGGTGGAGGGCAGCGCCGAGGAACTGCCCTCGCCGTTCCAGCTGCGCAGGAAGATCCTCATCAAGCACAAGAAGCTGGTGGAGGGCACGCTGTACGAGGAGGTGACCTCGGCCAGCTACTCGGAGAACGACATCAGCAACTCGCTGAAGAACGGCATCCTGTACCTGCAGGACCCCATCGATCATGTGAGCGCCCGGAGCGTTTCTATTGGCCCGCGTTCGGGGCGTGTCCAACACTGCCGGATCCACTCCCGCCAGGAGTCAGGCTCCACCCTCTTCTTCCTGACGGACAACCTGGTGTTCCCCAGCCTGCAGCGGCTCGTCTCCCACTACCGCCGCTCGCCGCTGCGCTGCCACCAGTTCCAGATGGCGCTGGGGAGCCCCGTGCCGCAGCCCAACGCACACGAGGCCAGAGCCAGTCGCTGTGTGTGGTTCCACTCCAACCTGAGCCGGGTCCAGGCTGAACACATGCTGATGCGCGTCCCGCGGGACGGAGCCTTCCTGGTCAGGAAACGCAGCGAGACACACTCCTACGCCATCTCCTTCAGCCTGGTGGACCTGGTGCGCTACTACGAGAAGCACCCGCTGTACCGCAAGATGAGGCTCCGCTACCCCATCAACGAGGACGCGCTGGACCGCATGGGCACCACGGAGCTGGACTACGGGGCGCTGTACGAAGTCCGGACGCCTCACTTCTATGTGGAGGCCAACAAGATGCCCACGGCTCGGTGCACGGTCAAGGCCCTGTATGACTACCGCGCTCAGAGGGAAGACGAACTCTGCTTCCCCAAGCAAGCGCTCATCCTCAACGTGGACAAACAGGAGGGCGGCTGGTGGCGCGGCGACTACGGGGGGAAGAAGCAGCTCTGGTTTCCTGCTAATTACGTGGAGGAAGTTCCCCCCACCCCCACCACGGAGCCCGACGAGGCCACCTCGGAGAACAGTCCACTGGGAACGTTCCTCAAAGGCTTCGTGGGCGACTACACCCTCTCCTTCTGGCGTTCGGGGCGTGTCCAACACTGCCGGATCCACTCCCGCCAGGAGTCAGGCTCCACCCTCTTCTTCCTGACGGACAACCTGGTGTTCCCCAGCCTGCAGCGGCTCGTCTCCCACTACCGCCGCTCGCCGCTGCGCTGCCACCAGTTCCAGATGGCGCTGGGGAGCCCCGTGCCGCAGCCCAACGCCCACGAGAGCCGAGAGTGGTTCCACTCCAACCTGAGCCGGGTCCAGGCTGAACACATGCTGATGCGCGTCCCGCGGGACGGAGCCTTCCTGGTCAGGAAACGCAGCGAGACACACTCCTACGCCATCTCCTTCAGCCTGGTGGACCTGGTGCGCTACTACGAGAAGCACCCGCTGTACCGCAAGATGAGGCTCCGCTACCCCATCAACGAGGACGCGCTGGACCGCATGGGCACCACGGAGCTGGACTACGGGGCGCTGTACGAAGTCCGGACTCCTCACTTCTATGTGGAGGCCAACAAGATGCCCACGGCTCGGTGCACGGTCAAGGCCCTGTATGACTACCGCGCTCAGAGGGAAGACGAACTCTGCTTCCCCAAGCAAGCGCTCATCCTCAACGTGGACAAACAGGAGGGCGGCTGGTGGCGCGGCGACTACGGGGGGAAGAAGCAGCTCTGGTTTCCTGCTAATTACGTGGAGGAAACCTCGGAGAACAGTCCACTGGGAACGTTCCTCAAAGGCTTCGTGGATGTTCCCAGCTGCCATCCGTCCTCCCGGCCGGGCCAGGCGATGGACGTGGCGGCCGACTCCCTGGAGGACCTGACCGCCTGGGTGGCCAAGATCCGGGAGGCTGCGCAGAACGCCGACGCGCGGATGCAGGAGGAGAAGCAGATGGAGAGGAGGAAGAAGATCGCGGTGGAGCTGTCGGACCTGGTGGTCTACTGCAGACCTGTGCCCTTCAACGAGCGAAAGATCGGGACAGAGAGGGCATGTTCCCGGGACATGTCCTCGTTCCCGGAGACCAAGGCCGAGCGTCTGGCCACGCGGGGGGGGCGGGGCCGCCGCTTCCTGCAGTACAACCGGCGGCAGCTCTCCCGGGTCTATCCCCGCGGCCAGCGCCTCGACTCCTCCAACTACGACCCGCTGCCCCTCTGGCTCTGCGGCTCCCAGCTGGTGGCCCTCAACTTCCAGACCCCCGACAAGCCCATGCAGATGAACCAGGCTCTGTTCCTGCTGGGAGGGGGGAGTGGCTACGTGCCCCACCCCGACGTCATGAGAGACGACGCCTTCGACCCTTTCGACAGGGACACCCTGCGCCTGGACCCAATCACCATTCAGCTGCAGGTCTGCGGTGCCGACTACGACAGCTGTAAGAGCAAGACGGAAGTTGTCGCGGACAACGGGCTGAACCCGGCGTGGCTCCAGACGCCGTTTGTGTTCGACGTGCGGAACCCCGCCTTCTGCTTCCTGCGCTTCACCGAGGAGGACGACCAGAACCTCTACTCCTCCATCCAGCGGCTGCGTGACCTCACCAGCCAGCTGTCCAATCAGGTGTCGGTGTTGGAGCGCACGGGTTCGGCCGACCAGAGTTACCAGCAGAGCCTGGATGAGCTGCGGGACGCCCAGGACCAGCTGAGTGAGCTGGTGGAGGCCCGGAACCACAGGTACACCCTGGTCTGCTCCACCCGAATCTGCTGCACCCTGAAGTAG

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00387	PI-PLC-Y	Phosphatidylinositol-specific phospholipase C, Y domain	Family	Interproscan
PF00388	PI-PLC-X	Phosphatidylinositol-specific phospholipase C, X domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000909	Domain	Phosphatidylinositol-specific phospholipase C, X domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR001192	Family	Phosphoinositide phospholipase C family	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR001711	Domain	Phospholipase C, phosphatidylinositol-specific, Y domain	Interproscan
IPR017946	Homologous_superfamily	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR035724	Domain	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1, SH3 domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10336	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004435	Molecular Function	phosphatidylinositol phospholipase C activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006629	Biological Process	lipid metabolic process	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0010634	Biological Process	positive regulation of epithelial cell migration	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0048015	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0051209	Biological Process	release of sequestered calcium ion into cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-