Gene detail

Detailed information of KAG7270539.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7270539.1	AMINO ACID TRANSPORTER	PIJE02000477.1	96	27276	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7270539.1

ACAGCCTACACCATCCCCATCCTGGCCTTTGCGTTTGTCTGTCACCCGGAAGTGCTCCCGATCTACACGGAGCTCCGAGACGCCACCAAGAAACGGATGCAGAAAGTGGCCAACATCTCCATCCTGACCATGTTCCCGGAGCTCCTGCACACCTACAGCCGTGTGAACCCCCTGGACGTGCACATCCTGTGTGTCCGTCTGGCCGTGCTGTTGGCCGTCACCCTCACCGTGCCCGTGGTCCTATTCCCGATCCGCAGGGCCATCCTCCAGATCTTCTGGCCGGAAAAGCCCTTCCACTGGGCCCGGCACATCGCCATCGCCGTGGTGCTGCTCTTCATCGTCAACCTGCTCGTCATCCTGATTCCCTCCATACGAGATATCTTCGGCCTCATCGGAGCCACCTCGGCCCCCAGCCTCATCTTCATCCTGCCCGGGGTCTTCTACATCCGGATTGTTCCTGAGGACCAGGAACCCTTAATGTCCCGGCCAAAGATACAGGCGGCGTGTTTCGCAGCATTGGGCTTCATCTTCATGGTCATGAGCTTGTCGTTCATCATCAGCGACTGGGTGACCGGGTTGAGCCACAGATCAGGAGCAGGAAGGTGGAAGGCAGGCACCACCAGCATGACCCGGGGAGCCAGGGGTCCGCGGGACACCTCCCACAGCACCCTGCTGAGCCTGCAGGAGAACCAGAGGGTGGAGGAGCTCCTGGGCAGGAGGTGCACTTCCATGGCCACAGCGGTGGTCCAGCTGTTCATGGCTCTCCCCCACAGTCCGTCCGCGTGGAGCCTGCAGCTGACCGGGGTCGTCAGCTTTGTGAAGGACAATCCCCAGCGATCGTATTTCCTGCGGGTGTTCGACCTGAAGACCGGACGCCAGTTCTGGGAACAGGAGCTCTACATGCATTTCGTGTACAACGCCGCTCTGGCGTACTTCCACACGTTCAACGCGGATGACTGTCAGGTGGGCCTTAACTTTGCCAGCACGCAAGAAGCAGAGATCTTCCAACAGGTTGTTGAGGCCAAGATCTACCAAAAAAACAGCCGCCAAGGTTTTCCCGCCCCTGCCGCCTTCCCCTCCTTCTCCTCCGCCGCCGGCAAGAAAGGGAAGGAGAAGAAGGGCAAGAAGGGGAAGATGCCCAAACTGTCCAAGGCCGACATCGGAGCACCCAGCGGCTTCACGGCCCCGCCCCCTAATAACAAAGGTTTTCCCGCCCCGGCTGCGGTGGAGGTGACCAACCCGGACGCCCAGGGCTCGTGGTTCCGCTCCGCGCCGCCGCCGGCCGCCACCCCCGCCGCCTTCCCCTCCTTCTCCTCCGCCGCCGGCAAGAAAGGGAAGATGCCCAAACTGTCCAAGGCCGACATCAGAGCAGCCAGCGGCTTCACATCAGGAGCAGGAAGGTGGAAGGCAGGCACCACCAGCATGACCCGGGGAGCCAGGGGTCCGCGGGACACCTCCCACAGCACCCTGCTGAGCCTGCAGGAGAACCAGAGGGTGGAGGAGCTCCTGGGCAGGAGCTTTGTGAAGGACAATCCCCAGCGATCGTATTTCCTGCGGGTGTTCGACCTGAAGACCGGACAGCAGTTCTGGGAACAGGAGCTCTACATGCATTTCGTGTACAACGCCGCTCTGGCGTACTTCCACACGTTCAACTCGGATGACTGTCAGGTGGGCCTTAACTTTGCCAGCACGCAAGAAGCAGAGATCTTCCAACAGGTTGTTGAGGCCAAGATCTACCAAAAAAACAGCCGCCAAGGCGGGACCCGGCCCCCTCCCCCAACTGGCCGACAGGGCCCTCTCCCTCCTCCCCCAACCGGCGCCTCCTCCTCTCGCTCGCTCCCGCGGCGCCCCGGCCCGCTACCCGCCCTCCCAGGCCACGGCCCCCAGCGCGGGGGCGCCCCGCCACCGCCCCCGGCCCACGGGGGTCCGCCCCCGCCGCCGCCCCCCACCAGCCGGGGCGGTCACTCGGCCGGCTCCTCTCCGCAGTCCAGGGCCTCCCAGGGGCCGCCCCCCCCACCGCCCCCCTCCTTCCCCAAGACCCCCGGGAGCTCGTTCCATCCGTCGTTCCCGCCCCCTCCCATGCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCTCCTCCTCCCCCTCCTCCTCCTCCAGGACCCCCCCGCCCGCCTCACCTCGGCACGGGACCCCCGCCTCCCCACCCGCCGCCGCCGCGACCACACGGCTCCGGAGGCTTCTCCTCTCCACCCCTCCCCCCTCCTCCTCCCTTCGGTGGGGGTCCCCCGGTCGGGCCGGGCGGAGGGGGCGGGGATGGGGGCGGGGATGAGGACGCTCCGGAAAGCCGCGGCGCCCTGCTGAGTCAGATCCGCCTGGGGAAGAAGCTGAAAAATGTGACGGAGTCCCCCGAGGCTGGTCCACCCGCGGGCGGAGAAAGCGAGGGCATCGTCGGAGCGCTGATGATGGTGATGCAGAAAAGGAGCAAAGCTATTCACTCCTCGGATGAAGATGACGCAGACTGTGTCGAGGATGACGATGACGATGACGAGTGGGACGACTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00568	WH1	WH1 domain	Domain	Interproscan
PF01490	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000697	Domain	WH1/EVH1 domain	Interproscan
IPR003124	Domain	WH2 domain	Interproscan
IPR011026	Homologous_superfamily	Actin nucleation-promoting factor WAS, C-terminal	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR013057	Domain	Amino acid transporter, transmembrane domain	Interproscan
IPR033927	Domain	WASP family, EVH1 domain	Interproscan
IPR036936	Homologous_superfamily	CRIB domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22950	AMINO ACID TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003333	Biological Process	amino acid transmembrane transport	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006868	Biological Process	glutamine transport	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0015186	Molecular Function	L-glutamine transmembrane transporter activity	Interproscan
GO:0015187	Molecular Function	glycine transmembrane transporter activity	Interproscan
GO:0015816	Biological Process	glycine transport	Interproscan
GO:0032329	Biological Process	serine transport	Interproscan
GO:0089709	Biological Process	L-histidine transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-