Gene detail

Detailed information of KAJ8366529.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8366529.1	SOLEUCYL-TRNA SYNTHETASE	AAFF_1.1_unplaced_578	242	57888	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00350830

ATGGAGCCACTACAAGTGGTCAGCAGCGTGGACGATGGACCATACGCCGTGAGAACAATATTAGGCTGGACGGTAAATGGACCACTCAGAGGTGGAAGCGATACAATGGAGACAAACAAACGGACAGAAGTCACTGCAAATCGAATCTCCGTAGCCAAGCTAGAAGAGCTCTGGCAACTGCAGTTCAAGCAGGACTTTCCTGATGCTGGACAAAACGAAGACATCGAAATGTCCAAGGATGATCACCAGTTTATGAACATGGTGTCTCAATCCTCAAAACTCGTGGATGGCCAGTACAGTGTTTGCCTTCCGATTAGGAACAAGTCATTGTGCATGCCAAACAACAGATCAGTCGCCGAGCAACGTGTGCTGAACTTACGGAAAAGATTCTCTAGAGATGTCAAGTTTCATACAGAATATGTTGCATTCATGGAAGACATCCTCAAGAAAGGCTACGCAGTGAAGCTCAATAGTGCTGAATGCGAGCCAACCGAAGGATCTAACATGGTATCTGCCTCACCACGAGTCAGACATCCAGTCAAGCAAAAACTGCGTGTTGTCTTTGACTGTGGAGCAAGCTTTCAAGGAACATCGCTGAACCAACAGCTCCTGCAAGGACCAGACCTAACAAGCTCGCTAGTGGGGGTCCTCATGAGGTTCCGACAAGAGACTGTGGCAGTTATGGCCGACGTGGAGGCCATGTTCCATCAGATCAGGGTCAGCCATGAAGACACGGATTTCTTCAGGTTTCTCTGGTGGCCTGATGGGAACTACGAGCAGGAGCTTCTTGAACACAAGATTGAGTTGAAGAAATCGATCAAAGAATGGAACACCAGCAAGATCACAAAAAACTTGCAACAGAAGGGTGTCCAGTGGCACTTCAACCCTCCAGCAGGCTCTCACCACGGAGGAAGCTGGGAGCGGCTGATCCGCTCAGTGAGAAAAATTCTGAACACCACAGTGAAGGAACAACCTTTGGACGAAGAAGGTCTCCATACCTTGCTGTGTGAAGCTGAGGCCATCATAAACAGCAGGCCCATCACAAAGGCATCTTCAGACCTCAATGACTTAGAGGCTTTAACGCCCAACCACCTGGTGTTACTCAAGGTCAAGCCCGAGCTACCACCAGGAGTATTCAATAAAGATGACCAGTACGCTAACCGAAGATGGAGGCAAGTCCAGTACCTCGCGGACGTCTTCTGGAAGCGCTGGTGCAAAGAATACCTCCCGCAGCTCAAGAACGTCAACGATGGTCCACACCTGGAAGAAACTTTTGCATCGGAGACGCGTGGATTGGAGCTGTCGCTGCTTCACACCAACGATGTCCACGCACGGGTAGAAGAGACCGGCGTGGACTCGGGGAGATGCGCTGAAGGGGAATGCTTTGCCGGAGTGGCGAGGAGGTTCACGAAAATAAGAGAGATTCGGAGCAGCGAGAAGAACGTGTTGCTGCTGGATGCAGGCGATCAGTTCCAGGGCACCGTCTGGTTTAACCACTACAAGGGGGCTGAAACTGCGCATTTCATGAACAAACTCGGGTACGATGCGATGgcatttggaAACCATGAGTTTGACAATGGAGTGGAGGGGTTGCTGAAGCCCTTTCTCCAGATGGTGAACTGCACAGTTCTCAGTGCAAACATCAAAGCAGACCAGACTGTGGCACCTGAATTCAGTCGCTACTACTTTCCCTATAAGATATTTCACATTGGATCTGATCGAGTGGCTGTGGTGGGATACACAACAAAGGAAACGCCAGATTTGTCTTTGCCGGgtCCGCACTTGGTGTTTGAGGATGAGATCAGTTCCCTGCAGGCCCAAGTGGACAAGCTGACTGCTCTGGGCATCGATAAGATCATTGCGCTCGGTCACTCCGGCTTTGAGGTGGACAAACAGATTGCCAGGAAAGTGCGAGGGGTAGATGTGGTGATCGGTGGACACACCAACACATTCCTGTACTCGGGCTCAGTGCCGTCTCTGGAGCTCCCCGCTGGGCCGTACCCCTTCATGGTGTCCTCTGAGGATGGACGGGACGTTCCCGTGGTCCAGGCCTACGCCTTCGGGAAGTACCTGGGCCACCTGAAGGTGACCTTCGACAAGGCGGGCGAGGTGGCGCGGGCAGTGGGCAACCCCGTTCTGCTGGACCGCAGCGTGCCGCAAGATCCCGGCGTTCTCGCCGAGGTGGAGGAATGGAAGAGGAACTTGGCAAATTACTCGTCTCAGTATGTGGGGCAGACCTTGGTGTACCTGAACGGGACATTTGAGGAGTGCCGGTTCCGGGAGTGCAACTTGGGAAACCTGATCTGCGACGCCATGGTAAGGCCGTCCACCTGGCAGGGCAGCCATGATCCTCCCACAGGTGAGGCCAGCCAGGTTCCTCCCACAGGTGAGGCTGTTCCCCTCTCGCGTCCAGCCAGGTTCCTCCCACAGTGGAACCATGTCAGCTCCTCCATACTGAACAGTGGGGCCATACGGTCATCCATCAGCGAGCGCAGCAGGAACGGTGTGTACCAAACCAAACCCCGCGCTACACAGGAACCCCAGAATCTAGAGATCCACCGCTGTGGCTCCATCACCATGGAGGAGCTGCTCTCCGTCTTGCCGTTCGGCGGGACGTTTGATCTGGTGCAGCTGAAGGGCTCGACGCTCAGAGACGTATTCGAGCATTCTGTCCGGAGATACGGACTAAACACAGGGGAGTTCCTGCAGGCGGCAGGGATTCAGGTTGAGTTTGACCTCTCCATGTCCCCCGTtcctcccgctcctccaggGATTCAGGTTGAGTTTGACCTCTCCATGCCCCCCGTGTCCCCCCGCTCCTCCAGGGATTCAGGGATTCCTCCCCATGCCCCCCCGCTCCCCGCTCCAGGGATTCGGGTTGAGTTTGACCTCcatgtcccccccctccccgctcctCCAGGGATTCAGGTTGAGTTTGACCTCTCCATGTCCCCCCCGTTCCTCCAGGGATTCGGGGATTCAGGGATTCGGGTTGAGTTTGACCTCTCTAAGCCCGCTGGCCAGCGTGTGGCCTCTCTGAGTCTGCTCTGCACGCAGTGTCGGGTGCCAGCGTACGCCCCGCTGGATCCAGCCCAGATCTACAAGCTGGTGCTCCCCTCCTACATGGCCAACGGAGGAGACGGCTTCTCCATGATCCGAGAGGAGATGCTGAAGCACGACAGCGGTGAGGCGTGGTGTAGGGCTCATAACCAGAAGCGCCTGTTTCGTCTGACCCACGATTACTCAAGACTGGAGAGGCACAAACTAGCGAGCCAGTCAGGTGACATGGACATCTCTGTCCTCCAAGGCTACATCGAGGAGAGGAAGAAGGTCCACCCTGCGCTGGAGGGCCGGATCAGCATCTCCAACGTGGCGGCAGGGACCACCAGCCCCTTCTTCCTGGTGCTACTTGGGCTGACTTGGGCGATGTCGGTGGGACAtttggtggccaattgtacccttgatttcttcaattcgccctcccccatgagccagTACCCgtggccagcgatgatccacctcctccgagatggaactcgcccacctgtcttgcAGGGACGCCCTTcacacttctcggcgagctcgtgccggctctccctcccgcctcccccttccccctggggtggacagccaatcgccgctgtTTTCATgttcactccacgagAACACAGTCCGCTAACGCCCCCCAAACGCGCTCACGGCTCCATGCTGCTGCTGCGGGCCGTAGCGAGCCGGGGAGCCGGGTTCCGCAGGGCCGCCGTCCACCCCGGCCTGCGCCCCGGCCTCTCCTGCAGCCTACGCCCCGGCCTCTCCTGCGGCCTGCGCCGCCAGCACAGTGCCGGCTCGCCCGGGGGCCGGGCCCAGCCCACCGCCGCCGCTCCGGGGGAGGGCAGATACCGGGACACCGTGCTGCTCCCGCGGACAGACTTCCCCAGGAAACTCGCCGGACAGGAGCTTGTGGAGCGAGAGCTGGAGATACAGCGGTTGTGCGGGTTCGCCGATCTCTACTCCTGGCAGAGGGACAGAAAGGGCAAGAAGGAGTACTGCCTGCACGATGGCCCCCCCTACGCCAACGGGGACCCCCATGTGGGACACGCCCTCAACAAGATCCTCAAAGACGTCAGGAACAGGTTCGAGATGCTGCGTGGGCGGCAGGTGCACTACGTGCCCGGGTGGGACTGCCACGGCCTGCCCATCGAGATGAAGGCCCTGGGAACGCTGGGCACCAGTGGACTCACCCCTCTGCAGATCCGGCACAAAGGTCCGCCCCCTGCTGGAGGGATGCTGCTATTGCCCCCCGTGTGGGGCGTGATGGCAGACTGGGACCAGTGCTACTACACCTTCGACGGGCGGTACGAGGCCAGCCAgctgagagtggtaaatctggactcatcagaccacatgaccttcttccattgctccagaGGCCTGATCTATCAGGACTATAAACCGGTGTTCTGGTCTCCCTCATCCCGgacGGCTCTGGCTGAGTCTGAGTTGGAGTATAACCCTCAGCATGTGAGCCGCGCCGTGTACCTCACCTTCCCTGTGACGAGCCCGTCGCCCAAACTGGCCTCGGAGTcggAGGGGCGGAGCCAAGTGTCTGTGCTGGTGTGGACGACTCAGCCCTGGACCCTACCGGCCAATCAGGCGCTCTGCTTCATGCCCAATGCTAAGTACTCCTTGGTGAAGAGTGCTGACAGCTCACAGCTCCTCCTTGTGGCCACAGAGCGCATTGCGAGTCTTGCGGCCGCACTTGGCACACAGCTGGAAGCCGTGGGCTCCCTCACAGGGTctgagctggagggtggggTCTGCCAACATCCCATAATCCCAGGCAAGGAGGTCCCCCTGTTGCCTGCTAATCATGTGACCATGGGCAAAGGGACGGGACTGGTCCACACGGCCCCAGCCCACGGGATGGAGGACTTCAGCGTGGCCTCGCGCTTCAGCCTTCCGGTCgagtgTATGGTGGATGAGGAGGGCAGGTTCACAGAGCTGGCTGGTCCTCAGCTGCAGACTCAGTCAGTGATGGACGAAGGGACAGACACggtgatCTGCATGCTGAAGCAGGCCGGGGctctggtgaaggaggaggaCTGTATCCATAGTTACCCGTATGACTGGAGGACCCAGCAGCCCGTGGTCATCAGAGCCAGCAAGCAGTGGTTCATCAACACGGAGAGTCTGAAGGACAGGGCCAAGGAGGCGCTGCAGAAGGTGCGAGTGATGCCAGAGTCGGCGCGGGGCAGTCTGTTGGCCATGCTGGACAGACGGACGTACTGGTGCATCTCCCGACAGAGGAGCTGGGGCGTCCCCATCCCCGTGTTCTACAACAAAGAGACTGGCCAGCCCCTCATCAACAAGCACACTGTGTCCCACGTGGCCGAAGTCTTTGCAGAGAAAGGCAGCGACAGCTGGTGGGAGCTGCCCCTGGACTCTCTGCTGCCCCCGGAGGTGCTGAAAAAGagcaAGGCGAGCACAGAGGTGGAATACGTGCGTGGTGAAGACGTTCTGGACATCTGGTTTGACAGTGGAGTGTCCTGGGCCGCAGTGCTGCAGGaccaggtccagttggttaccagccttgtgggtggatggggattcagccag

Transcript

AAFF_T00350830

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00133	tRNA-synt_1	tRNA synthetases class I (I, L, M and V)	Domain	Interproscan
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan
PF02872	5_nucleotid_C	5'-nucleotidase, C-terminal domain	Domain	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR002300	Domain	Aminoacyl-tRNA synthetase, class Ia	Interproscan
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR006146	Conserved_site	5'-Nucleotidase, conserved site	Interproscan
IPR006179	Family	5'-Nucleotidase/apyrase	Interproscan
IPR008334	Domain	5'-Nucleotidase, C-terminal	Interproscan
IPR009008	Homologous_superfamily	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036907	Homologous_superfamily	5'-Nucleotidase, C-terminal domain superfamily	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR050081	Family	Isoleucine--tRNA ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42765	SOLEUCYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004822	Molecular Function	isoleucine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0006428	Biological Process	isoleucyl-tRNA aminoacylation	Interproscan
GO:0009166	Biological Process	nucleotide catabolic process	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0032543	Biological Process	mitochondrial translation	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-