Gene detail

Detailed information of KAJ8377253.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8377253.1	ATP-CITRATE SYNTHASE	AAFF_1.1_unplaced_360	375788	388730	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00264810

ATGCAGACGCGTGCGGTCCAAGGCATGCTGGACTTTGACTACATCTGCTCCCGTGATGAGCCCTCGGTGGCCGCCATGGTCTACCCCTTCACagGGGACCACAAGCAGAAGTTCTACTGGGGCCACAGAGAGATCCTGCTGCCGGTGTATAAGAACACGGCCGATGCCATGAGCAAGCATGCAGACGCGGACGTGCTCATCAGCTTCGCCTCGCTGCGCTCAGCATTCGACAGCACCATGGAAACCATGCAGTACCCGCAGATCCGCACCATCGCCATCATTGCTGAGGGCATCCCTGAAGCCCAGACCAGGAAGCTGATCAAGAGGGCGAACGAGAGAGGCGTCACCATCATCGGCCCGGCAACGgtgggtGGGATAAAGCCCGGCTGCTTTAAGATTGGGAACACTGGTGGGATGCTGGATAACATCCTGTCGTCCCGGCTGTACCGGCCGGGCAGCGTGGCGTACGTGTCCCGCTCCGGCGGCATGTCCAACGAGCTCAACAACATCGTGTCCCGCACCACGGACGGGGTCTACGAGGGCGTGGCCATCGGGGCGACAGgccCAGCCCAGATGGTATCcgctgcccctctctccctgtgtccccCCAGGTACCCCGGCTCCACGTTCATGGAGCACGTGTTGCGGTACCAGGACTCCCCCGAGGTCAAGATGATCGTGGTCCTGGGGGAGATCGGGGGCATGGAGGAGTACAAGATCTGCCAGGGAATCAGGAGCGGCAGGATCACCAAGGAGAGAGGTGTGCTGGTGCATCGGAACCTGCGCCACCATGTTCAGTTTGGCCACGCTGGGCCTGTGCTAACCAGGCGTCAGAAACGGGCGGTGAGGAAGAACGAGGCCCTGCTGGAGGCCGGAGCCTTCGTGCCGCGCAGCTTCGACGAGCTCGGTGACCTCATCAAGACCGTCTATGAAGACCTTGTTGCCAAGGGAACCATTGTTCCTGCAGAGGAGGTGCCCCCCCCAACGGTGCCGATGGATTACTCATGGGCTCGGGAGCTGGGTATGATCAGGAAGCCGGCCTCCTTCATGAGCAGCATCTGTGACGAGCGCGGTCAGGAGCTGCTGTACGCCGGCATGCCCATCACCGAGGTGTTCAAGGAGGACATGGGACTGGGAGGGGTCCTGGGACTGCTGTGGTTCCAGAGGAGGTTGCCGCGGTACGCCTGCCAGTTCATTGAGATGTGCCTGATGGTCACAGCGGATCACGGGCCGGCCGTGTCCGGGGCCCACAACACCATCGTGTGCGCTCGCGCCGGCAAGGACCTCATCTCCAGCCTGACGTCCGGCCTGCTGACCATCGGGGACCGGTTTGGGGGGGCCCTGGACGCAGCTGCTAAGCAGTTCAGTAAGGCGTTTGACAGCAGCCTGCTGCCCATGGAGTTCGTCAATAAGATGAAGAAAGAGGGCAAGCTGATCATGGGCATCGGGCACAGGGTGAAATCGATCAATAACCCCGACATGAGGGTTCAGATCCTGAAGGACTTTGTGAAGCAGAGCTTCTCTGCCACCCACCTGCTCGACTACGCCCTGGACGTGGAGAAGATCACCACCTCCAAGAAACCCAACCTCATCCTGAACGTGGACGGATTCATCGGGGTGGCCTTTGTGGACCTGCTGAGGACCTGCGATGGATTCACACGGGACGAGGCTGATGAGTTTGTGGAGATCGGCGCTCTAAACGGAATCTTTGTGCTGGGCAGGAGCATGGGGTTCATCGGACACTATCTGGACCAGAAGAGGCTGAAGCAGGGCCTGTACCGCCACCCGTGGGACGACATCTCCTACGTGCTCCCGGAACACATGTCCATGTAACCGCGGAAACGCCGTCGCCGCGAGAGAGACCTCGCCGCGACCTTCAACCTCAGGGGTCAACTGAGTCCATTCGGCGAACGTCGTCTTtcctttagagcaggggtgtccaaactttttccactgagggccaaatacagaaaaatatacgaaaggctgggccactattgggggtGCTACACGAAAAACCTGAAAgcagtttgtttatttctcgaagttttcaatgaatacgggtggctccactagtggtgaaactaagaattacaactcagtcaagtgcaagtttcatgcgcgggccatattccttatattggaatgcggccgcgggccaatcaaaaaatggaccgcggccgcagagttggcccgcgggccgtagtttggacacccctgctttagaggaaaaaaaaaaaaccagtgcCATTTAAGAGCTAAGAGGAGGGCAGTGTGGGTTGtgttgtctgtttgtctgtttgtctgtttctCTGCGTCGTTTTGTCGTGAGCCTCCATTCATCCGATCATCTCCACCGAAGtttcccccacacacctccGTCCGCTCACAGAGGCTAATATCGCTGCAAACGCTTCTGTTCCACCTTAGACATGCGCTCGCTCGTAGTGAGAGAAGACAAAAGCAATCCGCCctagttttatatatatatacatatatatataggaagaCATAGATTTAAACATTCGTGGGATTAAAAGTAACGTAGTAATTTAAAGTGCCTGTACTCTTTTTAACCTGCTGACTGTAATCCTGAACTGGGCTTGACCCCTGTGTTCCACATGCCCTGAGAAAGCTTCTCGAACAGTAacatgtttgtgagtgtgtgtagtgtagtgtgtagtgtgtgtgtctgtctgtgtgtgcagtgtctgtgtgtgcagtgtctgtgtgtgttgtctgtgtgtgtgtgtgtgtgtgtatagtgtctgtgtctatagtgt

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00285	Citrate_synt	Citrate synthase, C-terminal domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002020	Family	Citrate synthase	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR016142	Homologous_superfamily	Citrate synthase-like, large alpha subdomain	Interproscan
IPR016143	Homologous_superfamily	Citrate synthase-like, small alpha subdomain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036969	Homologous_superfamily	Citrate synthase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23118	ATP-CITRATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003878	Molecular Function	ATP citrate synthase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006085	Biological Process	acetyl-CoA biosynthetic process	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0046912	Molecular Function	acyltransferase activity, acyl groups converted into alkyl on transfer	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-