Gene detail

Detailed information of KAJ8401890.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8401890.1	HEREGULIN-NEUREGULIN FAMILY MEMBER	AAFF_1.1_unplaced_67	1290400	1371235	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

AAFF_T00374710

CCGGAGTAATCGCACGCCGTAACTGCTGTGAACGCTTTGAGATCAATAACCGCGAAGTAGGAAGAGGCAGAAGTACGAGCAAAATAAACTTTGAGGAGTTATTTCACCGTCCGGCCGTGTCATTTTTTCCGCTGAAAGGAGTCTAATTTAAAGAATCATGTCAGATAAGAAAAGGAGCAAAGAAGGGAAGAAAGGtggaaataaaaaaggaaagaaagataAAACTGAAACACCAACTTCTTTAGACCCAGCACCGCCAGTTGCCCCCAAGCTGAAGGAGATGAAGAGCGTGAAGACAGACGAAGGGAAGAAAGCGTCACTAAAGTGTGAGGCAAAAGCCGGGAAGCCAGTACCAAATTTCAAGTGGTACAAAGACGGAAAGGAGTTTGTCGGCAAAAACAAACCCAAAGacgccaaaataaaaaaaaagaataaGGGAATGACTTCGGAGTTGGTGTTCAGAAAAACGGCGGAGTCGTACACCGGCTCGTACGTGTGCGAAGTCATCAACGACCTTGGAAGAGACCAGACCACTGGAAATCTGACGGTCATCAAAACTGCCACCAGCACCACTCCATCCGTGAAGACCTCCAGCCATGTGATGCCATGCAATGAGAGCGAGAGGAACTACTGCGTGAACGGAGGGGAGTGCTTCACCCTGGAAATCAAACCCGGACAACTCAAGAACCTCTGCAGGTGCCCAAATGAATTTACTGGTGATCGTTGCCAAAACTACGTAATGGCCAGCTTCTACAAGCATCTTGGGATTGAGTTTATGGAAGCTGAGGAGCTGTACCAGAAACGTGTGCTAACCATAACGGGCATCTGCATTGCGCTCCTGGTTGTGGGCATCATGTGTGTCGTTGCCTACTGCAAAACAAAAAAGCAGAGGAAAAAACTTCACGATCGACTGAGGCAGAGCCTGCGGACTGAGCGCAATACCATGGCCAGCATGGCCAACGGCCCCCAGATGCCCCATCCTCCCCCAGAGAGCGTCCAGCTCGCCAACCAATACGTGTCGAAAAACGCCGTCCCCGCTGAGCATGTAATCGAGAAGGAAACGGAAACATCGTTCACCGCAAGCCAGTGCACTTCATCAGCCCATCCATCTACGACAGTCACCCACACGTCCAGCCAGAGCCGGCGAAACGGGCGGAGCGAGAGCCTGCTCTCGGACAGCCGCTCCGTTCTGGTGATGTCATCGTCGGTGGAGAACAGCAGGCACTCGACGCCCTCCAGTCGACGGGGGCGCCTGAATGCCATAGGGGGCGCCCGCGGCGACCCGAGTGCCTATCTGAAGAACCCCAGAGACACCCCAGACTCGTACAAGGATTCTCCCTACAGCGAGAGGTATGTTTCAGCCGTGACGACCCCAAACCACATGTCTCCGGTGGACCTGCAGTCCCCAATATCCCCCCAGTCCCCGCCCTCTGAGACGTCCCCGCCCCTCTCCAGCCTGGCCACCCCTGTCCCCTCGGTGGCCGTCAGCCCGCTGGGCGAGGAGGAGCGCCCCCTGTTGTTCGTCACCCCGCCGCGGCTGCGGGACAAGCAGCGCCAAGACCACGCCCAAAGCGGCCAGTACCAGCGCCACTCCGCCCACTACAACCACGGCCTGGAGGCCCACAGCCCGCCGCCCAGCCCCCTGCGGATCGTGGAGGACGACGAGTACGAGACCACGCAGGAGTACGAGACAGCCGCCGCCCAGCCCGCGAAAAAAACTCGCCAACGGCCGCAGGGCCAAAAGAACAAAGCTCAATGGCCACGTGGCACACAAGACGGAGTCCAACAGCGACACGAGCTCGGAGAGCAGCAGCTCGGAGAGCGAAACGGAAGACGAGCGGGTGGGGGAGGACACGCCCTTCCTCAGCATACAGAACCCATTGGCCGCCAGCCTGGAGTCGGCGTCCAGCTTCAGGCCTGCAGACAGCAGTAGGACTAACCCAGGACTCCGCCTCTCCCCGCAAGAGGATTTGCAAGCCAGATTATCCAGTGTAATAGCAAATCAAGATCCTATTGCTGTATAAATTGAAAAATAACGTTAAGAGTTACTTgtcagaaataaaaaacaaaaaaaagaaaatacaaaattgtaCAGTCACcactaaacctttattttatataaattaagTATTTGAgggaaataattttaaaaaaataaaacttttattttagcGAAGTAGTGAATAAAGTCTTTTATAAATTAAAACGTGTGCAAATGTGTTCGTGTCATGGAAGTGCCATACACTTGTATGTAGCATAGGTCACAGTATTTCAATGGAGAAGACTATCAATGGTgcctttattttcagttttgtgaacagaagagaaatgcATTACGACACTGGGCCATATATTCAAGACATTCATGTGGCTAAATATTTGCTTGTTTTAAGTTGTGACAAATTCCACCAGCAATGTGTATTTAATTACACCATAACTCAACTAATATCCAAGTGTAATGTGTAAAATTCAGACCCTAAATTTTCAAGACTGTCTTATTTAATTTGAGAAAAATGGTatacaaagaaaatatttgGCTGAAGGAGGACAGCATTAACTGAAACGGCAACAGTCGTATAATAACATATATTTTAAGGTTATCCCCTCTAAAGACATTACAATTTAAATTGGCAGAGATCTGCTATGCTAATAAGTTTTTTTTCCAAGTCATTTACAGTGATAAAAATACTAGTTGCTAATCGATAGCATGTGTATATGCTCTCGGACAGCCAATCTGTTCTGGTGATGTCATCGTTGGTGGAGAATATATATAATGGAAAGACACAGGCACTTTTTCATATTGGATATTGTTAGATTTGGTGGATTTCAGCCATTGtgttttagtgatttttttcagTAACAATTACGGAACCCTCTGTAAGTCCCATCACATAAAGAAACTGCAGGAGCTGTTTCTGCATTACTGGATCTTGCTGTCATTTTACCCAAAGTCAGCATCAACAAAGTCAGTtcaaaataatgataattaaacAGGAATTAGGACCCTGTATTATTAAGCAATTGTAATTAGTGAATGGAATTAAGCTTCAAGAGTGACTCATTTGGATAAAGCTGTTATCCAAAGTTATCTTTTATCCGATCAACCCTTTATCCATGAAATGCCATgccagtattttttatttatttcagcagtgtgtgtgtgtgtgtgtttgtgtgcgtgaatATGAATCACCTTTCTACAGTCATCCATGGTCTAATGTCAAAAGCGTGTAATGTATTTAGCTTCCCTTCAAAGTAATGTAGTGTCATTACCTAGAAGGGTTATATATGAACTCTTGAATATATGGCTCATTACTTCAAAGTGTTTCCAGACATTCATTGATTCTTAAGTAATGCATTGTGGGGGATTATTATTATAGCACCAGTTCTGTAGATATCAACAGCCTCTTTATTTGTCTGACTGTAATTAAAAGTATTTGCCACAAGCTTTAATCTTGCGCTTCTGTGTCCTTTTACACCCATGTGAAATGTTACATTATCCCAAGTGTTCTTTTGCGcccttatttttttgtttttttgttccctCTGTTGAATTCattatgtgtttatgtaaaattatttgtatttaatgacATAAACATTTACCCTTTATGTTACCTAATGATGTAGTCTTTTTGTTATACTCTACAGTTATGTCATAGATAAAATATTCATCCTCCCGTTTCAGAAATGGTGATCCCAACCTCCCCATAACCCATGTTTGAAACCCATgttagaaaaataattaattagcaaaagaataaaacaataagacTTTATTTGTAGTATTTGTAATATCTGAGGCCTGAATAGACTGTGACATAGTAGTGTATTTGGAAAGAGGGCTGATTATCGTTCATTACTGTCTAACAGGAAAGTGGAACTGTGCCCTCGTTGTCATGATtggaaaacaatacaaaaaacattacCCAAAGAAAGAATTACATTACCTATGGTTATCCTTATAagataacatatatatatatatatatatatatatattgtgcttTTCTCAATAGTAAATGAGGCCCTTTGAAGATGCTTTTATATTTatcttatttatatatttatttatttattttttgggccttatgtaatcaattatagATTCTATATTTTAACCTGAAGTGTTTTATATATTAAGTTGGTATTAAAAAGATACctgaagatttatttttttgttagatTCATATGTGTTTTGATGGTCCTCAAAGCCCTTGCGCCTGTTTTCTTTAGAATGGGGTTAAAAGGGCTtccttttgttttagttttttttgtttttattttgccactgtcaacatttttactcatacTGTTGGTGAACATAATAAAAGCATATGAAAATGCACAAGctgattaatttttttgttatttttttatttttttatttttttttttgtatttgcagTTTACCTATACAATGATATTCCATTGTATGGTTAAGAAGCAAAATGTGAACCATAGCAAATCCTTGCATGTCTGTGGGTCTCAATTGGACACCTTATTAgatggtgtttttattttctattaagCCTTTGCTACAGTTGAGGTGGCATACCCCATGATGCATTGCTTTTAACCAACGATGTGTCCATTAATGTAAATACACCATGAAAACACTGACAACATTTGATCtaaatttaaatattaaacCAAGTGTCTTGTGTTTATCACTTGTCCATaacctctgtctttctcccctcAATATTGTCATTCATGGCACATGCAAATAcactttgttgttattattattattattattattatattattttgtatttgctgGCTGTTTAGATGCAGTCTTTCTGTACTTCTTACCACTGAAATGTAAGAATGATGCATTTTAATTGGGTACTCGGTTCAGCAACATTgctaatattatatattaagccgttaacaatacagcaaaatagcagcCTACGGGGAAATGCAGAAATGAAAGGTGTTATTGCGAGCAATACATGCATGACCATACTGCgccaaatgcatgcatgcattgcGCCAAGGGGAAAATGTGCATGATTTGAGATGATAGAATGAGCCACAATGATGACTAATGGCTACAATTGTACAAACAGGGCTACTGAACtacttttttcccattttattttaaaaatctggcAATGGATTCCCATTAAAAGTGTGCTGATTCCAGTTTCTTTTGTGTggaatatactgtactgtatagtgTTCTGAGCACAGCACCGCACTCTCAGGGGCCTGTGAAATCCCTTGAATCTCATCATCCCTTGAATGATCGGCAGTCCACCATGCATACAATGGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02158	Neuregulin	Neuregulin intracellular region	Disordered	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR002154	Domain	Neuregulin, C-terminal	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR018250	Family	Neuregulin-1	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR040180	Family	Neuregulin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11100	HEREGULIN-NEUREGULIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007171	Biological Process	activation of transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0007399	Biological Process	nervous system development	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030296	Molecular Function	protein tyrosine kinase activator activity	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0045499	Molecular Function	chemorepellent activity	Interproscan
GO:0048513	Biological Process	animal organ development	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-