Gene detail

Detailed information of KAJ8402885.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8402885.1	HYDROXYMETHYLGLUTARYL-COA LYASE	AAFF_1.1_unplaced_61	2297845	2337373	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00361990

ATGGCGACAGTTGTAATGCGGTTGTACGGGGCTGTCTGTCTCGCTCCGAGTTTCGGCCTTCGAAGCATCGCCTTGAGGTCAACAACCGCGGCAGTGAGAGCTGTGGGTGTGTCCTCTTTAAAGGCTCTTCCTGAGAGGGTGAAGATCGTAGAGGTGGGGCCCAGAGATGGGCTGCAGAACGAGAAGACGATCGTCCCGGTGGAGGTGAAGATACGGCTGATTGACATGCTCTCTGAGGCGGGACTTCCTGTCATTGAGGCCACAAGCTTCGTCTCTCCAAAATGGGTTCCCCAGATGGCGGACCAGGTGGAGGTGATGCAGGGGATTCACCGGCGGCCAGGAGTCATCTACCCTGTCCTCACGCCAAACCTGAAGGGCTTTCAGGCTGCTatgAAGGCCGGGGCAGGGGAGGTGGCCATCTTTGGTGCCGCCTCGGAGCTCTTCAGCAAGAAAAACATCAACTGCTCCGTGGAGGAGAGCCTGCAGCGCTTCGAAGAGGTCACCAGGGCGGCGAGAGAGGCCGGCGTTCCTGTGCGGGGGTATGTGTCCTGTGTGCTGGGGTGCCCCTATGAAGGAAAGGTGTCTCCTGAAAAGGTGGCTCAGGTGGCGAAGCGTCTGTATGCTATGGGTTGCTATGAGATATCCCTTGGCGACACCATCGGCGTGGGAACGCCGGGCAGCATGCGCACGATGCTGGCAGCGGTGATCCGGGAGGTGCCAGTTGGCGCTTTGGCCGTACACTGCCACGACACCTACGGCCAGGCTCTCGCCAACATCCTCGTTGCCCTGCAGatgggtgtgagtgtggtggACTCCTCAGTAGCAGGGTTGGGAGGATGTCCGTATGCTCAGGGCGCATCAGGAAACGTGGCTACAGAGGACGTGGTGTACATGCTGCAGGGCCTGGGGATCCACACCGGAGTAGACATGGCCAAGCTAATGGATGCGGGAGCGTTTATCTGTCAGGCTCTGAACCGGAGGACCAGCTCAAAGGTGGCCCAGGCTTCCTTTTATaatggcacatgcacacagctgGGCCTCTGGCTGGGGCAGGAGCCTGGTCACGAGTGGCCACGGGTGGCTGGGATGGCGCAGAAAGTTCTGGTAACTGGGGGAGCGGGGTACATCGGCAGCCACTGTGTGGTGGAGCTCATCGAAGCCGGTTACTACCCTGTCGTCGTGGACAACTTCAGTAATGCTGTCCGAGGAGATGGAGGTGTTCCGGAGAGCCTGCGCAGGATAGAGTCATTTCTGGACACCAGCATCGAATTCCAGGAGCTGGACCTGCTGGACAAACAGGGGCTGGAGAAGCTCTTCcaaaagcACAAGTTTTCAGCAGTGATGCACTTTGCGGGCCTAAAGGCGGTCGGCGAGTCTGTGGAACGGCCACTGCGGTACTACCGGGTCAACCTGACTGGGACCATAAACCTGCTGGAGGTGATGCAGGCTCAGGGGGTGCACAGTATCGTGTTCAGTAGTTCAGCCACGGTTTACGGGGATCCCCAGCGCCTGCCCATTGATGAGGACCACCCCGTAGGGGGGTGCACCAACCCATATGGCAAAACCAAGTACTTCATAGAGGAGATGATCCAGGACCAGTGCACCGCTGAGAAGGACTGGAGTGCGGTGCTGCTGCGCTACTTTAACCCCATCGGCGCTCATGCTTCAGGCCAAATCGGGGAGGACCCCCAGGGGATCCCCAACAACCTCCTACCCTACGTTGCCCAGGTGGCCGTCGGGAGGAGAGAGCAGCTCAACGTGTTTGGGAATGATTACAACACTCCCGATGGAACAGgAGTGAGGGATTATATCCATGTAGTGGACCTGGCTAAAGGACACATCGCAGCTCTCAGGAAGCTGAAGGACAGCTGTGGGTGTAAGgCGTATAACTTGGGCACGGGCACTGGCTACTCTGTGCTGCAGATGGTGAAGGCCATGGAGAAGGCGTCGGGGAGGGAGATCCGGTACAAGATTGCCCCGCGGCGGGGGGGCGACATCGCTTCCTGCTACGCTGACCCCCGGCAGGCAGGAAAAGGAGCTGGGCTGGAAGGCCAGCTTCGGCCTGGAGAAGATGTGCGAGGACCTGTGGCGCTGGCAATCCCAGAATCCCACTGGATTCAGCAACGGCCTGGAGTCCTGAAGCTTGCTCCAATGACCTTGCTGATCGTGGATCACATGACCAGACCAAGTattgcaagtgattccgcggtcctgaccgattgcgggaggtcgttccaccagcgagggatcaggacagagaagaggcgagaccgcgaggagcggctgccaggcgcccggacgGATGgggtcagtttgccagaggaggcggagcggaggggtctgggcggggtgtcgggagtgatgagtgactggaggatgatcgccctgctGGAAAGCGATTtgcttgggctgttcacctgcctccgctgcaagctcattgagcatctcgaagacaagattcttgttggggatctccttgagcgtgtggacaagctcctggccaaagcagaaggggatccagtggtcatggtccacgtagggaccaatgacatggacggagacactatggagccttccacggtgattgacgcatcaatcgtcggggagcccttcacagggaggaagagcagctctgtcttccccaggttcagcttcaggtggacggggcctagcaccgagccctgcgggactccggtagagagggtgtggggaggagagggatcctctccaggccacctggtaggaccggtcagccaggtcgaggaggaggaggacggagctaagggaagccccgtgaagagcctcagtgaccgcaaggagagcagtctctgtggagtggcctgctctgaacccagattggttgggatcaagcaggtcgttctGTCTCCAGCAGGCCCCGCTGCCCCCACGTACTGCAGTGTGGTGGACCAGGCCGCCTCCCTCTTCATGCCCGTGGCGTACACCCTGGTGTTCTGCCTGGGGCTCCCGGGCAACGCGCTGGCCCTGGCGGTGCTGTGGCGGAGAGGTGGGTGTCTCAAGCCGGCGATGCGTGTGTACATGCTGAACCTGGCAGCGGCCGATGGGCTGTTCACGCTCATGCTGCCGGTGTGGGGGGTGTACTACGCCCGTGGCGAGGACTGGCCCCTCCCAGAGCCGCTGTGTCGCATGGCAGGGGCCCTGTACTACACCACCACCTACTGCGGCGTCTCCTTCCTCACCCTGATTGCCATCAACCGCTACCGCAGCCTCACCCTGACCACAGCCGTCCTGCCCATGATGAAGGGCCGGGGTGCAGCCTGCGTGTGTGCGCTCACCTGGCTCACCTGGCTGGCCTGTGCCACGCCCTCCATGGTCACGCCCCAGAGCCATGCCCCGgcgggggaggaggggcggAGGCTATGCTTCCGGGACGTAGACCCCCACTGGGCGCTGGCAGTGTGCGGGTTCTGGGCGGTGGCGTTCCTGGTGGTCCTGGTGTCCTACCTGTCCATCCTGGGCTCACTGGGCGTGGCGGCATCTCGGCGCAGGGCTCACCGTCGCCGGGCGGCCTTTGCGGTGCTGGGCATGCTCGTTGTGTTCCTGAGCTGCATGCTGCCGTACCACGGGGGCCTGGCGGCCTGGGCGTGGCAGAGCCCGCCCCCCGCATGCCCGTCGCTCACACTCCGCCTCTCCACCGCGCTCTTCAGCGCCACATGCTGCCTGGATCCCGTGGTGTACTGCTTCTCGCTCCCCCACTTCCGCAGGGAGGTGCGGAGGCTCCTCCTCTCTGCCCGGGCCACGCCCTCACCTCACCCTCGCTCTGCCCGCCACCCTACACCGTGCAGGGAGCCCCGCTGGGCACAGGCCCCAAATCCAGCAGCAGGACCTTCTCCTCCTAGAGCTGGGGGACCCCTCCGTCACACACAGCCTGACCCCTCTGCCCTCTGGCCTCCTGAAGTCGCTCCGTCAGTGATGTCACCAGAGGCGTGGGTGGCTGCGGATGAGTGGCAGAGTGCTTCGTGGCacacccggccagagcagactctggtgcggctggtggaatcgagccccggtcgcagtggccagcgccaaACGTTACGCGATGATGACATCACTACCGCTGTGGATCTTCAGTCCGAACAGGCGGACAGACTCCTCACAGGTTCGGGAGCCTCAGAGATGGCCTGTTATCAATAG

Transcript

AAFF_T00361990

GTGGGCAGACGCCACGTCACTTATCGGTCAGTTCTGCTGAAAATGGCGACAGTTGTAATGCGGTTGTACGGGGCTGTCTGTCTCGCTCCGAGTTTCGGCCTTCGAAGCATCGCCTTGAGGTCAACAACCGCGGCAGTGAGAGCTGTGGGTGTGTCCTCTTTAAAGGCTCTTCCTGAGAGGGTGAAGATCGTAGAGGTGGGGCCCAGAGATGGGCTGCAGAACGAGAAGACGATCGTCCCGGTGGAGGTGAAGATACGGCTGATTGACATGCTCTCTGAGGCGGGACTTCCTGTCATTGAGGCCACAAGCTTCGTCTCTCCAAAATGGGTTCCCCAGATGGCGGACCAGGTGGAGGTGATGCAGGGGATTCACCGGCGGCCAGGAGTCATCTACCCTGTCCTCACGCCAAACCTGAAGGGCTTTCAGGCTGCTatgAAGGCCGGGGCAGGGGAGGTGGCCATCTTTGGTGCCGCCTCGGAGCTCTTCAGCAAGAAAAACATCAACTGCTCCGTGGAGGAGAGCCTGCAGCGCTTCGAAGAGGTCACCAGGGCGGCGAGAGAGGCCGGCGTTCCTGTGCGGGGGTATGTGTCCTGTGTGCTGGGGTGCCCCTATGAAGGAAAGGTGTCTCCTGAAAAGGTGGCTCAGGTGGCGAAGCGTCTGTATGCTATGGGTTGCTATGAGATATCCCTTGGCGACACCATCGGCGTGGGAACGCCGGGCAGCATGCGCACGATGCTGGCAGCGGTGATCCGGGAGGTGCCAGTTGGCGCTTTGGCCGTACACTGCCACGACACCTACGGCCAGGCTCTCGCCAACATCCTCGTTGCCCTGCAGatgggtgtgagtgtggtggACTCCTCAGTAGCAGGGTTGGGAGGATGTCCGTATGCTCAGGGCGCATCAGGAAACGTGGCTACAGAGGACGTGGTGTACATGCTGCAGGGCCTGGGGATCCACACCGGAGTAGACATGGCCAAGCTAATGGATGCGGGAGCGTTTATCTGTCAGGCTCTGAACCGGAGGACCAGCTCAAAGGTGGCCCAGGCTTCCTTTTATaatggcacatgcacacagctgGGCCTCTGGCTGGGGCAGGAGCCTGGTCACGAGTGGCCACGGGTGGCTGGGATGGCGCAGAAAGTTCTGGTAACTGGGGGAGCGGGGTACATCGGCAGCCACTGTGTGGTGGAGCTCATCGAAGCCGGTTACTACCCTGTCGTCGTGGACAACTTCAGTAATGCTGTCCGAGGAGATGGAGGTGTTCCGGAGAGCCTGCGCAGGATAGAGTCATTTCTGGACACCAGCATCGAATTCCAGGAGCTGGACCTGCTGGACAAACAGGGGCTGGAGAAGCTCTTCcaaaagcACAAGTTTTCAGCAGTGATGCACTTTGCGGGCCTAAAGGCGGTCGGCGAGTCTGTGGAACGGCCACTGCGGTACTACCGGGTCAACCTGACTGGGACCATAAACCTGCTGGAGGTGATGCAGGCTCAGGGGGTGCACAGTATCGTGTTCAGTAGTTCAGCCACGGTTTACGGGGATCCCCAGCGCCTGCCCATTGATGAGGACCACCCCGTAGGGGGGTGCACCAACCCATATGGCAAAACCAAGTACTTCATAGAGGAGATGATCCAGGACCAGTGCACCGCTGAGAAGGACTGGAGTGCGGTGCTGCTGCGCTACTTTAACCCCATCGGCGCTCATGCTTCAGGCCAAATCGGGGAGGACCCCCAGGGGATCCCCAACAACCTCCTACCCTACGTTGCCCAGGTGGCCGTCGGGAGGAGAGAGCAGCTCAACGTGTTTGGGAATGATTACAACACTCCCGATGGAACAGgAGTGAGGGATTATATCCATGTAGTGGACCTGGCTAAAGGACACATCGCAGCTCTCAGGAAGCTGAAGGACAGCTGTGGGTGTAAGgCGTATAACTTGGGCACGGGCACTGGCTACTCTGTGCTGCAGATGGTGAAGGCCATGGAGAAGGCGTCGGGGAGGGAGATCCGGTACAAGATTGCCCCGCGGCGGGGGGGCGACATCGCTTCCTGCTACGCTGACCCCCGGCAGGCAGGAAAAGGAGCTGGGCTGGAAGGCCAGCTTCGGCCTGGAGAAGATGTGCGAGGACCTGTGGCGCTGGCAATCCCAGAATCCCACTGGATTCAGCAACGGCCTGGAGTCCTGAAGCTTGCTCCAATGACCTTGCTGATCGTGGATCACATGACCAGACCAAGTattgcaagtgattccgcggtcctgaccgattgcgggaggtcgttccaccagcgagggatcaggacagagaagaggcgagaccgcgaggagcggctgccaggcgcccggacgGATGgggtcagtttgccagaggaggcggagcggaggggtctgggcggggtgtcgggagtgatgagtgactggaggatgatcgccctgctGGAAAGCGATTtgcttgggctgttcacctgcctccgctgcaagctcattgagcatctcgaagacaagattcttgttggggatctccttgagcgtgtggacaagctcctggccaaagcagaaggggatccagtggtcatggtccacgtagggaccaatgacatggacggagacactatggagccttccacggtgattgacgcatcaatcgtcggggagcccttcacagggaggaagagcagctctgtcttccccaggttcagcttcaggtggacggggcctagcaccgagccctgcgggactccggtagagagggtgtggggaggagagggatcctctccaggccacctggtaggaccggtcagccaggtcgaggaggaggaggacggagctaagggaagccccgtgaagagcctcagtgaccgcaaggagagcagtctctgtggagtggcctgctctgaacccagattggttgggatcaagcaggtcgttctGTCTCCAGCAGGCCCCGCTGCCCCCACGTACTGCAGTGTGGTGGACCAGGCCGCCTCCCTCTTCATGCCCGTGGCGTACACCCTGGTGTTCTGCCTGGGGCTCCCGGGCAACGCGCTGGCCCTGGCGGTGCTGTGGCGGAGAGGTGGGTGTCTCAAGCCGGCGATGCGTGTGTACATGCTGAACCTGGCAGCGGCCGATGGGCTGTTCACGCTCATGCTGCCGGTGTGGGGGGTGTACTACGCCCGTGGCGAGGACTGGCCCCTCCCAGAGCCGCTGTGTCGCATGGCAGGGGCCCTGTACTACACCACCACCTACTGCGGCGTCTCCTTCCTCACCCTGATTGCCATCAACCGCTACCGCAGCCTCACCCTGACCACAGCCGTCCTGCCCATGATGAAGGGCCGGGGTGCAGCCTGCGTGTGTGCGCTCACCTGGCTCACCTGGCTGGCCTGTGCCACGCCCTCCATGGTCACGCCCCAGAGCCATGCCCCGgcgggggaggaggggcggAGGCTATGCTTCCGGGACGTAGACCCCCACTGGGCGCTGGCAGTGTGCGGGTTCTGGGCGGTGGCGTTCCTGGTGGTCCTGGTGTCCTACCTGTCCATCCTGGGCTCACTGGGCGTGGCGGCATCTCGGCGCAGGGCTCACCGTCGCCGGGCGGCCTTTGCGGTGCTGGGCATGCTCGTTGTGTTCCTGAGCTGCATGCTGCCGTACCACGGGGGCCTGGCGGCCTGGGCGTGGCAGAGCCCGCCCCCCGCATGCCCGTCGCTCACACTCCGCCTCTCCACCGCGCTCTTCAGCGCCACATGCTGCCTGGATCCCGTGGTGTACTGCTTCTCGCTCCCCCACTTCCGCAGGGAGGTGCGGAGGCTCCTCCTCTCTGCCCGGGCCACGCCCTCACCTCACCCTCGCTCTGCCCGCCACCCTACACCGTGCAGGGAGCCCCGCTGGGCACAGGCCCCAAATCCAGCAGCAGGACCTTCTCCTCCTAGAGCTGGGGGACCCCTCCGTCACACACAGCCTGACCCCTCTGCCCTCTGGCCTCCTGAAGTCGCTCCGTCAGTGATGTCACCAGAGGCGTGGGTGGCTGCGGATGAGTGGCAGAGTGCTTCGTGGCacacccggccagagcagactctggtgcggctggtggaatcgagccccggtcgcagtggccagcgccaaACGTTACGCGATGATGACATCACTACCGCTGTGGATCTTCAGTCCGAACAGGCGGACAGACTCCTCACAGGTTCGGGAGCCTCAGAGATGGCCTGTTATCAATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00682	HMGL-like	HMGL-like	Domain	Interproscan
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000138	Active_site	Hydroxymethylglutaryl-CoA lyase, active site	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR000891	Domain	Pyruvate carboxyltransferase	Interproscan
IPR001509	Domain	NAD-dependent epimerase/dehydratase	Interproscan
IPR005886	Family	UDP-glucose 4-epimerase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR043594	Family	HMG-CoA lyase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42738	HYDROXYMETHYLGLUTARYL-COA LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003978	Molecular Function	UDP-glucose 4-epimerase activity	Interproscan
GO:0004419	Molecular Function	hydroxymethylglutaryl-CoA lyase activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0006012	Biological Process	galactose metabolic process	Interproscan
GO:0006552	Biological Process	L-leucine catabolic process	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016833	Molecular Function	oxo-acid-lyase activity	Interproscan
GO:0046951	Biological Process	ketone body biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-