Gene detail

Detailed information of KAJ8409644.1 in Aldrovandia affinis Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAJ8409644.1	FI17866P1	AAFF_1.1_unplaced_29	338650	384658	-

Gene Structure

More details in Jbrowse Sequence

CDS

AAFF_T00217030

ATGCGCTCGGTGGAAAGGGGGTCACCCGAGGTCAACTTGGTGCGAGTTGTTGATGTGTGGGGCGGGttCTGTTCTCACAGGAGGGTGCGGTCTGCCGCCTCCGGCTCTGGACACGGTTTGGACGACCGCACGAGGAtcagatggtgtGATTACCTCGACTGCATCTCCAGCCAGTCCCGACTCAccctgggggaggaggagaggggctcCCTCTTCGGGAACATCCGAGACATCTACCACTTCAACAGTGAACTGCTGCACGACCTGGAGAAGTGCAATGCTGACCCCGTGGCCATCGCCGAGTGCTTCGTAGCCAAGagtGAAGACTTCCACATTTACACTCAATACTGCACCAATTACCCGAGGTCGGTGGCGGTCCTGACGGAGTGCATGAGGAACAAGGCGCTGGCCAAGTTCTTCCGGGAGCGGCAGGAGTCTCTGCACCACTCCCTCCCGCTCGGGTCCTACCTGCTGAAGCCCGTCCAGCGGATCCTCAAGTACCACCTGCTCCTGCATGAGATCGCAAACCACCTGGAGAAGGGCACGGAGACGTACGACGTGGTGCTGGAGGCCATCGACACCATGCAGAGGGTGGCCTGGCAGATCAACGACATGAAGAGGAAGCACGAGCACGCCGTCCGGCTGCAGGAGGTCCAGAGTCAGCTCACCAACTGGAAAGGGCCGGACCTGATTAGCTACGGAGAGCTGTGTTGTAACCTGATGCTGGTGGAACTCATAACAAAAGAGCCCCTGAGCTTCAGTGTGTTCCATTACAAGAACCCCAAACTGCAGCACACCGTCCAGGCCAAGTCACAGCAAGACAAGCGCATGTGGATCCTTCACCTGAAGAGATTGATACTTGAAAACCACCCTGCTAAAATTCCAGCCAAGATCACCCCGGGTTCCACTACAGcccagagggagagaagaaatcCTCCTCCCACGCCAAGGAGGCCCCACAACGAGGCGGGTGAGGAGGAAGTCAGACTGCTTAAGAATTCCAAGCAAAGCGCAGCCAATCCAGACGCTCAAAAGCGGAGCAGTCTGGGGGTGTCCCTCCTGTCCCCTGGCTTTGGGATGAGCCCCAGAGAGGGTCTGCTGGCCTCCATTGGTCGAACCCGGAGCCTGGTCAACCAATCACAGGAGTCGCTGGACCCGGGCGACCCCAGCGACACCGAGGACCGCTCGCACCTGCAGGACGCCGACGATGAGGATGAAACCTGCCCGGGTTCAGGGAAGAAGGTCAAAATCCAAGGAAAAGGCGCTCGGAAAAGACTCAACCCCCAGGTTTCTGTGGACAGCATCGATAAGTGGCAAAATTTCAACATCGGCGCATGTGACTTACAGACTGCCAAAGAGTCCCTGCAGATGGACGCAGGCCGCTCCCCCCTCCACAGCATGTCCCGCCAGTCGGAGTCGCATGCGGACCCCCGCCTGGCCTCGGTGCTCGGCGGCGACCCCCTGGTCCGGAACATCTGGACAGACCACCAGATTCGGCGCGCCATGTTCCCCACCcgccagcagaccctgcaggGGGAGGACGAGGACGACATCTACCAGATGTTCCTCCCCACGGAGCCGTCCGTCCCCGAGCGAGAGCCGTCCCCAGCGCGGGAGGGTGGGCGCCCGCCGGGCCGGCCCGTCAGCTGGCACGTGGAGCAgccggaggaggaggacgaggaggcggcgccccctgcaggccggAGGATGCTGCGACGCGCGAGCAGCCCCGACGGCCTGCAGACGGAGACGTCCAGCAACGTGTCGGGGTCGGACTCGGCCGAGCAGCTCACCATCGACGACATCGAGAACGTCTACGACAACATCAGCTACGAGGACCTGAAGTCCATGGGGCTGATGCGGCGGGACGCGGAGGGCTGCCAGGCCCCCCgccggagagggggaggagaagcTGAGAGGGAACGCGGGGCTCGGGGAGAGACCTGCTATCATGGAGGAGAACATCTACGACACCATCGGCCTCCTGGACCGGCCTCCGCCCAAACCGTGCAAGAGCGAGACGGAGGCGGGGGCGGAGGCGGGAGGGGGAGGTCGGGAGGCCCTCGGACTCCGGAGCCGGATTGCACGGCGCGCGGCGGCGGCCTGGGCGGGTTCGTCTCCGAGGAGAGCCTGCGTCAGGGCGGGGCCGGCGAGCGGGACGCCGACTCCTCCTCCAACTCGGACTCGCTGCCCCGCCGGGGCCCTGCCGACAGGATGTCCGAGCAGGTGGACGAGATCTGGAATGACCTGGAGAACTACATCCGGAAGAACGAGAAGAAGCCGGACCGCCTGCCCGCCGCAACCCCCGCGCTGAACATCCCGGCGCTCCTGCGCGAGGTGACCGTGGAGGAAGACGAGTCCCCCCCGCCCTCCGCTCTCGCCCCCTTCGTCACGGAGATGACCCTGGGCACCGTCAGGGCGGTGAAGAGCAGGCTGGCGAGGCTCAGCAGCGGCAGCTTCCGATTCGACGACGACGGCAGCGACGGgcagaaggaggaggggggcgccCTGCTCGGCCTCAGCGGAAACGTGTTCCCCGGTGACCTCGCCAGCCTGGACCACACGGTGGCCTCCACCGGCAGCCTGCTGTCGGCCTCCAGCGTCGACCTGCCGCTGGAGTGGGGCGACAAGACCCGCAACCGCGTCTTCCTCATGGCCCGCCAGTACAGCCAGAAGATCAAGAAGGCCAACCAGCTGCTGAAGATGAGGAGCCCGGAGCAGGAGAACCTGGGCAGCCGCCTCAGGGCCAAGCAGAAGGACCTGGCAGACATCCTGGAGGAGAAGAAGCAGGGAGGAGCCGCTATTGGTaaacccccctccacccccccttttGACACCTGCTGTCGCGCACGGATTGCAGAGTACTCTCACCTGTACGAGCAGATCATGTTCAAAGAGATGCCCCCGGGAGGCCTGCGGGTCTCTCAGAGCCCTTCAGAGGAGTCCCCCTCCCACCGAAGCTCCCAGTCCGACTCGGATGGCAGAGGTGTGGATGGGGACGACTGGCTGCACTCCACCTACAGCAACGGGGAGCTGGCCGACTTCATCTCCTGGCCTAACGACGAGGGCCGCACGTCGACCCCCCAGCCAAACCTGACCCCCGCCTGCTCCGCCGTGGCCCTGAAGGCCCCGCCCAttcccctgcccctgcccccgcccaaCCAGAGGTGGAGCGCCTGCATAAGCCAGACGATCGCGGGGAGCTTCGAGCAGGAGCACATCTACAGCTCCCTGGGCCGACGGCCTTCGTCCGCCAAGGCGCCGCCTACGGCAGGAGAACAGCCGCGCGGCCTCCAACCACAGCCTGGCGGGCGAGAAGACCCCGCGGTTCCCTGTCCCGGCCTCGGCCAATCGGGACGCCAGTACAGCCTCCCGGAGAAGTCATCGTCGTCATCGTCGCCGCCGCCGTCGCACTCGTCGTCGAACGGGCATTCGGACCTGACGCTCCGGGACAGCcagcaggtggtggtggtgagcaGACACTCGCCGCTGAGCGCCCACAGGGCCACCCAGAACTACCTCGCCAACTTCAAGGACAATGGGGACGAGGACGACGAGGACGAGGACTACGTGGAGATCAAGTCGGAGGATGAGGAGCAGGACTCCAGGGTGCAGGGAAGGCCCCCGCCGCAGGGCGTCTCCGTCTCCGCCCCCTGCTCGGACAGACAGTACAGCAGAGGCCTGATCCAGTCGCAGAGCCTGCCCTGCACCCCCGTCAAGACTTGCCACCACGCGAACATCAACCCCGTCGTCTCCCTCTCGGCCTTCGCCGATCGAGGCAAACTTAGCGACTACCTGTGGAGCGAGCCCCAGGCCGCCCAGCAGAACATAGTGCAGGTCAAGTTTACGATgagtgggtctggggtgctggagttgtCGTCGGCGGcttggcgggtgccgtctcgaaagagacaatgcttcgcctttgacaccgccggtcacagggctacggcagggaactcataCAAGATGTCGCTGTTAGACGGTCCGCTGAACGTGCTCGGCCAGAGAACGACTGGGGAGTCGGTGCGCACTCAAAATGTCATGGCGGCATCCTCCATCGCCAACATCGTGAAGAGCTCCCTCGGTCCAGTTGGCCTCGATAAGATGTTGGTGGATGACATCGGTGATGTGACCATCACTAACGATGGGGCCACAATACTGAAGCTGCTGGAAGTGGAACACCCTGCAGCCAAAGTGCTGTGTGAGCTGGCTGAGCTGCAGGACAAAGAGGTCGGAGACGGGACAACCTCAGTGGTGATCATCGCTGCGGAGTTGCTAAAGAGTGCAGATGAACTTGTGAAAcagaaaattcaccccacatcCATTATCAGTGGATATCGCCTGGCTTGCAAGGAAGCAGTTCGGTACATCAATGAGAACCTCACCATTTGCACAGATGATTTGGGAAGGGAGTGTCTGATCAATGCAGCTAAAACCTCAATGTCCTCCAAAATTATCAATGTTGACGCAGACTTCTTTTCCAACATGGTGGTGGACGCCACCCTGGCAGTGAAGTTTGTTGACGCGAAGGGCGTGGCTCGCTACCCCATAAACTCCGTCAACGTGCTGAAAGCCCACGGACGCAGCCAGAAGGAGAGCTACCTGGTGAACGGCTACGCGATCAACTGCACCGTCGGGTCACAAGGCATGGTGAAGCGAGTGCTCAATGCCAAGGTGGCGTGTCTGGACTTCAGTCTGCAGAAGACCAAGATGAAGCTGGGCGTCCAGGTGCTCATCAGCGACCCGGAGAAACTCGACCAGATTAGGCAGAGGGAGAGTGACATCACCAAAGAGCGCATTCAGAAGATCCTGGCCTCGGGGGCCAACGTCATCCTGACCACCGGGGGCATCGACGACATGTGCCTCAAGTACTTTGTGGATGCGGGCGCCATGGCTGTCCGCAGGGTGTTGAAGAGGGACATTAAACGCATCgctaaggcaacaggagCCACGATGTGCCCGTCCCTGACCAacctggagggggaggagaccTTCGAGCCCACCATGCTGGGCCAGGCCGAAGAGGTGGTgcaggagagagtgtgtgacgaCGAGCTCATCCTCATCAAGAACACCAAGGCCCGCACCTCGGCCTCCATCGTCCTGCGCGGGGCCAACGACTTCATGTGTGACGAGATGGAGCGCTCCCTGCACGACGCGCTCTGCGTGGTCAAGCGGGTTCTGGAGTCCAAGTCCGTGGTGCCGGGCGGCGGTGCCGTGGAGGCGGCCCTGTCCATCTATCTGGAGAACTACGCCACCAGCATGGGTTCCCGTGAGCAGCTGGCGATCGCGGAGTTCGCCCGCTCCCTGCTGGTCATCCCCAAGACCCTGGCGGTGAACGCGGCTCAGGACTCCACCGACCTGGTGGCCAAGCTGCGTGCTTTCCACAACGAGGCCCAGGTCAACCCGGAGCGCAAGAACCTCAAATGGATCGGCCTGGACCTGGTGAACGGCAAGCCCCGGGACAACAAGCAGGCGGGCGTGTACGAGCCCACCATGGTCAAGACCAAGAGCCTGAAGTTCGCCACGGAGGCGGCCATCACCATCCTCCGCATCGACGACCTCATCAAGCTGTTCCCGGACCAGAAGGAGGGGGGCCAGTCGTACCAGGAGGCCGTCCAGTCCGGCTCCATGGAGGACTGA

Transcript

AAFF_T00217030

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan
PF00621	RhoGEF	RhoGEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000219	Domain	Dbl homology (DH) domain	Interproscan
IPR002194	Conserved_site	Chaperonin TCP-1, conserved site	Interproscan
IPR002423	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR012715	Family	T-complex protein 1, alpha subunit	Interproscan
IPR017998	Family	Chaperone tailless complex polypeptide 1 (TCP-1)	Interproscan
IPR027409	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR027410	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR027413	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan
IPR035899	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR043324	Domain	PKHG1/2/3, pleckstrin homology (PH) domain	Interproscan
IPR053374	Family	TCP-1 chaperonin-containing T-complex	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45924	FI17866P1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-