Detailed information of Lsat_s045.g0045.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s045.g0045.t1POLYCYSTIN-1Lsat_scaffold0459767451174423-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00801PKDPKD domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000203Conserved_siteGPS motifInterproscan
IPR000601DomainPKD domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014010DomainREJ domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP