Detailed information of Lsat_s052.g0150.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s052.g0150.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Lsat_scaffold05233691023394270-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF13676TIR_2TIR domainDomainInterproscan
PF18139LSDAT_eukSLOG in TRPMFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR041491DomainTRPM, SLOG domainInterproscan
IPR050927FamilyTransient receptor potential cation channel MInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13800TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0070838Biological Processmetal ion transportInterproscan
GO:0098655Biological Processmonoatomic cation transmembrane transportInterproscan
GO:0099604Molecular Functionligand-gated calcium channel activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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