Gene detail

Detailed information of Lsat_s059.g0068.t1 in Lamellibrachia satsuma Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Lsat_s059.g0068.t1	MYOSIN VII, XV	Lsat_scaffold059	2381623	2436197	+

Gene Structure

More details in Jbrowse Sequence

CDS

Lsat_s059.g0068.t1

ATGCGACCGACTTCAACCGGTATTCGTCAAAACGGCTTTGATAGGCGAATCAGCCAGCTCAGTGTACCGTATAGGTCGGCGGGCGTGGGCACACCTTGGCGTGCACGGAGGATACCTCGGGAGACGAGTTTACACCTCTCCAGCACTGTCATCGACATGGCGACAGCCGACAGTATGACGGCGTCAGACCCTGCCGACGAGGTGGAAGCCAGCATTGAGGGTTCCAACGAAGAGCTGACGGCGGATTTCCGCGCACATCTCGGATTACTAGACGGCGACGAAGACACGCTGACCGATGTATTCAAGGCGACGATTGGTCTGCTTGGAGAAGAGCGGGTCAGCGAGGTGTCCGAGGTAGAGCTCGCCATCACGGAGGAGAGGGATGAAACTCTCAGCAGCTTCCAGTACAAGAAGTTCGCGAAGCAGTATTTCATCGGGGGTAACTCGAGTGTTTTCTCGACGGAAGCTCTCAGCAGTCCTCTACTGCCAAAGACACACAAAGTCGACAAAATGGCTGCTATGGCTGTGTGGCTAGCTATCCTACGATACATGGGCGAGATGCAGGCACCGACACCTGCCACCAACACGGCACACGCGGACAAGGTCCCAATCATGACGAAGATATACATGGCACTCGATAGGCGACTACGGAGGAACTCGCGGAAGGGCAGTACAACCAGCACCGGAAGTACGGGCAGCGCGGAGGAAGATCAGAAGGACATCACGAGCTTCAAGCTGAGCAAGCGACGGTCGTGGAAGAAGATCTTCAGTCACCGCAACTCGTCGAAGAAACATGACCTGGCGCGGTCCAACAGCGAGAACGGCCGAGAGTTCGACTACTCGACCGACATGAGACTCATGCTCGATATGCTGCCGACCAGTCAGATGGAACTCATCCACTTCATCGTCGGCCACGGCATCCTGCGCAGGGAACTCAGGGACGAAATATTTTGTCAATTATGCAAACAGTTATCGGGAAATCCGAGCGACGACAGTATGGTCAATGGCTGGGCTCTGATGGCGTTCTGCACTGGCTGCTTCAAACCGTCCGATCAGTTCCGGAAGCACTTGAAGAGTTTCCTGTACGCCGTCGTGCCGGAGTTCAAGGACCACGCCTCCTACGCTCATAGACTGCTCAGACGGACGTCAACCAACGGCACGAGGTTTCACCCGCCCAACTTCCTAGAAATACAGGCTACGAAAGCGAGGCAATACGTTCTTCTTCCGGTGACGTTCGCCAATGACCGAGTGGAAAGCGTCGAGGCTGACGCCGCAACGACATCGACGGAGGTCGTCGCCAAACTCGCCAACAAGATCGGACTCAAGGACACGTTCGGATTTTCCATTTTCGTCGCTATTTTCCACAAGGTGTCGTCTCTAGGCAGTGGTCTCGATCATTTAATGGACGCTATCTCAGAATGCGAACAGGTGGCGCGAACGAAGGGCATCAAGGAGGAGGACGCTTCGTGGCGGTTGTTCCTCAGGAAGGAATTGTTCGCGCCGTGGGAGGACCCTGGTTACGACGAAGTGGCGGCGTCCTTGATATACGATCAAATCTGCAAAGGCGTACGCTCCATGGAATACGGCATGCCCGCGGAGGACGAAATGGCTGCATTCGTTGCCCAACGCTTTTACGTGGAGCACGGCCCGGCGTTGATACCTGGTAAAGTACAGACGGCACTCGAGAAGTACCTTCCTCGCAAAGTTCTCAGTGGCTCCAAATCTCGCGAGGGTTGGGTGCAGGCGATAATCTCGTCGTTCAACGAACAAGGCCTGTCGGATTCGAAAGCGTCAGAGAAGGAGGTAAAAGAACGAATTGCCACTTCGGCGTCCCAACGCTGGCCTGTTCACTTCTCGGCTTTGTTTGTCGCCTTCCGCCTGTCTGGACCTCGTCTACCCAAGAACGAGGTCGTTGTCGCCGTCAGCGGAGAAGGGTTCTACGTGATGGATCAACCCTTCAGGGTCATCGTCGAAATCGGATATTATGAGCTGGTTGAGGTGTTCAGCAGCAGATCCGACCGTGGGCTACCGACGTCGAAGATGCACGGCCAGAGTTTCAGTCTGATAACGGTGAAGGGCGACGAGTTCACGTTTGCCAGTCCAAATGCTCACATCATCACGCAACTGTTGTCTAACTTCCTGGACGGCCTAAGACGACGCTCTATCTACGCTGTAGGCCTCGAACCATTCGTCGGTCAGAAAATCGACGGAGCAGACACCGACGCAAGCGCCAAGCCGTTCCGTTTCCGGCAAGGTGATCTTATCATATTGATCGATGACATTCCTGGGTGCTCGAAAAAGGAGGACTGGACGTTTGGGAAATGCGTACGAAACGGGTCCATTGGACAATTTCCGTTTGATCTTGTCTACATTCTACCGGCGATAAGGAAACCACCGCAGGACTTTGTGGAGTGTTTCAGCAACATGAGCAACCAAAACACGGAAACACTGCCCCGGAAGAAAGGTTCCGTTTTCCTGACGAAGGGAACAGTGGGACGCTGTGGGATGCACGGGAAGGATTCGGCTGCTTGA

Transcript

Lsat_s059.g0068.t1

ATACGTATGCCTGCGCTGTTGCAGTGGCGAAGTCAGTGAAGCGTCTGACCCAATGCGACCGACTTCAACCGGTATTCGTCAAAACGGCTTTGATAGGCGAATCAGCCAGCTCAGTGTACCGTATAGGTCGGCGGGCGTGGGCACACCTTGGCGTGCACGGAGGATACCTCGGGAGACGAGTTTACACCTCTCCAGCACTGTCATCGACATGGCGACAGCCGACAGTATGACGGCGTCAGACCCTGCCGACGAGGTGGAAGCCAGCATTGAGGGTTCCAACGAAGAGCTGACGGCGGATTTCCGCGCACATCTCGGATTACTAGACGGCGACGAAGACACGCTGACCGATGTATTCAAGGCGACGATTGGTCTGCTTGGAGAAGAGCGGGTCAGCGAGGTGTCCGAGGTAGAGCTCGCCATCACGGAGGAGAGGGATGAAACTCTCAGCAGCTTCCAGTACAAGAAGTTCGCGAAGCAGTATTTCATCGGGGGTAACTCGAGTGTTTTCTCGACGGAAGCTCTCAGCAGTCCTCTACTGCCAAAGACACACAAAGTCGACAAAATGGCTGCTATGGCTGTGTGGCTAGCTATCCTACGATACATGGGCGAGATGCAGGCACCGACACCTGCCACCAACACGGCACACGCGGACAAGGTCCCAATCATGACGAAGATATACATGGCACTCGATAGGCGACTACGGAGGAACTCGCGGAAGGGCAGTACAACCAGCACCGGAAGTACGGGCAGCGCGGAGGAAGATCAGAAGGACATCACGAGCTTCAAGCTGAGCAAGCGACGGTCGTGGAAGAAGATCTTCAGTCACCGCAACTCGTCGAAGAAACATGACCTGGCGCGGTCCAACAGCGAGAACGGCCGAGAGTTCGACTACTCGACCGACATGAGACTCATGCTCGATATGCTGCCGACCAGTCAGATGGAACTCATCCACTTCATCGTCGGCCACGGCATCCTGCGCAGGGAACTCAGGGACGAAATATTTTGTCAATTATGCAAACAGTTATCGGGAAATCCGAGCGACGACAGTATGGTCAATGGCTGGGCTCTGATGGCGTTCTGCACTGGCTGCTTCAAACCGTCCGATCAGTTCCGGAAGCACTTGAAGAGTTTCCTGTACGCCGTCGTGCCGGAGTTCAAGGACCACGCCTCCTACGCTCATAGACTGCTCAGACGGACGTCAACCAACGGCACGAGGTTTCACCCGCCCAACTTCCTAGAAATACAGGCTACGAAAGCGAGGCAATACGTTCTTCTTCCGGTGACGTTCGCCAATGACCGAGTGGAAAGCGTCGAGGCTGACGCCGCAACGACATCGACGGAGGTCGTCGCCAAACTCGCCAACAAGATCGGACTCAAGGACACGTTCGGATTTTCCATTTTCGTCGCTATTTTCCACAAGGTGTCGTCTCTAGGCAGTGGTCTCGATCATTTAATGGACGCTATCTCAGAATGCGAACAGGTGGCGCGAACGAAGGGCATCAAGGAGGAGGACGCTTCGTGGCGGTTGTTCCTCAGGAAGGAATTGTTCGCGCCGTGGGAGGACCCTGGTTACGACGAAGTGGCGGCGTCCTTGATATACGATCAAATCTGCAAAGGCGTACGCTCCATGGAATACGGCATGCCCGCGGAGGACGAAATGGCTGCATTCGTTGCCCAACGCTTTTACGTGGAGCACGGCCCGGCGTTGATACCTGGTAAAGTACAGACGGCACTCGAGAAGTACCTTCCTCGCAAAGTTCTCAGTGGCTCCAAATCTCGCGAGGGTTGGGTGCAGGCGATAATCTCGTCGTTCAACGAACAAGGCCTGTCGGATTCGAAAGCGTCAGAGAAGGAGGTAAAAGAACGAATTGCCACTTCGGCGTCCCAACGCTGGCCTGTTCACTTCTCGGCTTTGTTTGTCGCCTTCCGCCTGTCTGGACCTCGTCTACCCAAGAACGAGGTCGTTGTCGCCGTCAGCGGAGAAGGGTTCTACGTGATGGATCAACCCTTCAGGGTCATCGTCGAAATCGGATATTATGAGCTGGTTGAGGTGTTCAGCAGCAGATCCGACCGTGGGCTACCGACGTCGAAGATGCACGGCCAGAGTTTCAGTCTGATAACGGTGAAGGGCGACGAGTTCACGTTTGCCAGTCCAAATGCTCACATCATCACGCAACTGTTGTCTAACTTCCTGGACGGCCTAAGACGACGCTCTATCTACGCTGTAGGCCTCGAACCATTCGTCGGTCAGAAAATCGACGGAGCAGACACCGACGCAAGCGCCAAGCCGTTCCGTTTCCGGCAAGGTGATCTTATCATATTGATCGATGACATTCCTGGGTGCTCGAAAAAGGAGGACTGGACGTTTGGGAAATGCGTACGAAACGGGTCCATTGGACAATTTCCGTTTGATCTTGTCTACATTCTACCGGCGATAAGGAAACCACCGCAGGACTTTGTGGAGTGTTTCAGCAACATGAGCAACCAAAACACGGAAACACTGCCCCGGAAGAAAGGTTCCGTTTTCCTGACGAAGGGAACAGTGGGACGCTGTGGGATGCACGGGAAGGATTCGGCTGCTTGATCGCTCCCAGACGCGACAGAACAGTTGGAAGAAGACATGGTGTTGGCACTCGTTGTCACGCAGTCACGTGATATCATTATGACACACGCACTGTCGACGAGAGTAGAAACTTTACAGGGTTTTAGTGACTTAACCGGATGACCCACATTTCAACTGAGCAGTGTTATGGCGCAAGTTACACAGCTATCATTGCAAATCGCTTTGATACTTTTGATGTCTATGGTTGTGCATTAGTAGTAAACAACACACAACTAATCGTTATCGCACGTTATCGACAGTATTTCTATAGTAAATGCACTTCAGTATAACAAATGCATGAATCATCCATATTGATGGCGACTGAGCAACATTAGACAGTTTCAGCCATACATATAATACTCCGAACAGGACAGTTCATTACACTGTAATTAAATAAAAACTTTTAATGGTTCAAGAAGATGTTAGCCGATGATATTGCTCGTGTTATTTTATATTCACGCCGGGTCTTAGTATGTGGCTTTCATTTCGTTCACTTTAACGCAGTCAGCATCGAGATAACTGCTTTTTTGAATACGGTATAATTATGTAATACGTTTGTTAGGTTGTGTGTGCATTTCCATGTACGTGCCTGTGTTATGTTTGTAGCCTCGTTTGTGTGTATATGTGTATGTACGTGTGTGTACGTGTGTGTACGTGTGCGTGTGTAGGTGCGTGTTCGCGCGGGGTGTATAATTTTATGTTCAATTCTGATATCACGTTTCTGCTTGCACACTCAAACTACCACATTTCTTATATTAGACATTCGTTATGGTGATCACTGTTGTAGTCTGGTGCATCATTTCACACATAGCAATTAAATATAAATTACATATAAACCTAACATTCCACTTCTTTACAGATGCATTTTTTATGGTAACGGGAACACTGCACCCATATATATATATATTAAGCACAAGTCGACACGTACTGAATACATTTGCAACGACTACACCAACGAAGAGATTGTCAGATAAAGACACGTTTATGTTGCTTCTCGTGAATAAATTTGCATCGTTACATTGTTTGATTGTTTGTGATTTAGGAAACGCTTACTGTTTACATCGTGTGCACATCTACCGATG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00784	MyTH4	MyTH4 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000299	Domain	FERM domain	Interproscan
IPR000857	Domain	MyTH4 domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR019749	Domain	Band 4.1 domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR035963	Homologous_superfamily	FERM superfamily, second domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR038185	Homologous_superfamily	MyTH4 domain superfamily	Interproscan
IPR041793	Domain	Myosin VII, FERM domain C-lobe, repeat 1	Interproscan
IPR051567	Family	Unconventional Myosin ATPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22692	MYOSIN VII, XV	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005856	Cellular Component	cytoskeleton	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-