Gene detail

Detailed information of OFRAG00000001981.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000001981.1	AGAP001464-PB	tig00000369	239899	255185	-

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000001981.1

ATGGAATTGGAATATGTAGAGTTAGAATATGACATTAAAAATAGCTGTAAAATATTCCTTTTTGGTGCTACAATTGTATCATGGATTTCAAACAAAAGGCAAATGCTCTACCTGAGTGATAGTGCTGTGTATAATGGAGTAAAAGCAATCCGAGGAGGAATTCCTGTTGTATTTCCCAATTTTGGAGCCTGGAGCCAAGGGCCTCAACATGGATTTGCCCGTATTTCTCATTGGTCTTGTACTCAGAAACCATTAAAGAATGCGGATGGTACAATTACTACGATTTTAGAATTAAAAGATGATGCAATTACTAGAAAAATGTGGAATCATTCATTTACATTGCAGTACAAGGTCACATTGTCAGAACATTGTCTTCACGTAGATTTCAATGTCCAAAACACTGGTAACAACGCCTTCGAATTTACCGTTTTACTTCACACATATCTCAAGGTCGATGATATCCACGCGACCTCTGTAGATGGGGTCAATGCCCTCACCTACTATGACCAGTTGAAAGACAAAGAGGAATGCGAGATTAACTACTCTTTAAAAATAACAGAGAATATAGACAGGATCTATAAGAATACTGGAGAATCTCATACAGTTGTTATTGATAGTAAGGGAACGAAAGTCATTGTTTCCAAATGCAATTTACCCGATACAGTGATCTGGAACCCTTGGGTTGTTAAAGCACGCGGCATGTCCGATCTCGATGATGATGGCTACTTATCAATGGTGTGCGTTGAACCGGGCAATGTCTGTTCCGCGAGAATCCTACCCAGTGGAGAGTTATTGTCATTCGTCATTTACTCTAAATTTCTTCATATTCGCCGACCTTTTTCTTTCTTATCACGTCTGCCGGTAATAACTACGACTGATATGGACGACTTCTCGTTTGGCGATGTACCGGCTTTGGAAAATGATGATATCTTTAATATGTTATTCGATGAGACGAATTTGTCACCAGAACAGTTAAACAAGTCATCTCCTTTCCAAGAAGATGTACCAATAGATTACGGATTCCTCGACGAGGGCTTCTCGTCTGCCAGCGTGATTCCCGACTTCGAGAACTATGTTCCGGCCGCTCCCGAAGGCTACGAGTCCGTCCGAGGAAGCTACTCGTCTGCGCAGGAGGGTTACACCGCCGCCTGCGAACTCGCAATCGCCGCTCCGACTGAGCCCGACTTCGAACCGCAAGACCTGAACAGTCGTCTCGCGCGGGAGTTTGAGGAGCTGTTCGCGCCCCTCTGCCCCGAAGTCGGTGTTGGTGACACCGCGACCCCGGCACTCGAGGAGACGGTGCGGTGCGAATTCGCCGCCGTGACCTCTGCCGCTGCGACCTCTGCGCTGGAGTCGGAACGTCTCGTGTCCATCGAATCCGACCACTGCTACATCTCGCAGAACTCGCCGAACCTCTCCGGAGACGAGGAAATCATCGTTGACGTAGATGACTCGACAACGCCTGTCATCGCATTTAGTCCGACCAGTTCCTACGATTACTCCGGTGAATCTGTGCACTCTGATGTCTCTTCGCCACTAGGTGGTACCACCGAGTCAATGCAGATCAGCGATATCTTGGAACAGTGTAAGTCGGCAATGGACGCTGCCAATAAGATCTCGGATGAAGATATAGAGATGACCCATGAAGAAGATACTTATCCGCAAGTACTTGACATCTATGCATCCGCAAAGGAAATTCGAATGAACGCAAACGAAAGAGCCCCGATGCAGTACTCCCACGTGAGTTTAACTGCCGAGGAAAAGGAGTTATTGAAGAAGGAAGGAATTGTTTTGCCCGAGGATATGCCCCTTACGAAACAGGAAGACCGTGCCCTTCGCTGTGTCAGGCGGAAGATTCGAAACAAGGTGTCTGCAAAAGAAAGCAGAAAGAGGAAGCAAGTTTATGTTGACGGTCTTGAGAAGAGGATTAAGAACTGTACTGTGAAGAATATGCAACTTCAGCGTAAAGTAGACATTCTCGAGACTAGCAATGTTACATTGATGTCTCAGTTGAGAAAGTTGCAGACTCTGTTCACTCCGAAGCATGTGAATAAACCTGCCCAGACCAAGACTTGCCTCATGGTAATGCTATTATCTTTAGCTTTGTTCGCTGCCCCCAACGTCAACCAAATGACTTCTTCAGCTAACCATGGCAACCAAGCCTCCGACCCCGTTGAACAACCCCAAACTAATACCGGCCGATCCAGGAACCTCTTGCAAGCAACCAAACCCTCGCTTGAGCCGATGTACGACGACGTTGAAGAGGATACGGCCAACTGCGCCATTGGAGCCGCCATCGACAAGGCGTCGTACTCGGGTCCGGGTTCCGGTGGCAAGTGGCGAGAACTACAGGCACTACTCAACGATTCCGCCGACGTCGGGCGGTTGCTAAGACAACAAGAGGAGTCGTTGCGTCGCGACCTCGAAACTCCGCTGAACGACCTCGTCAACGAGACCCAAGCGGCTCTCAATTCTGCGGCCGAAGCCTTTCGGCGATCCGAAGCAATCTCAACCGAATTTATTGACGACGGCATGCAAGAATCTGATTCTGAAGAATTGAACATCAAGATAGAGTCCGCTTTGAGAGGCAATGAAGACGTGTACATAGACCAGACTTCTCTGTATGATATGCTAGCTACGTACGATATGAACAAAGCTGCAAATATACCAGCAAAGAAGAGGAGGAGGGTGGCTGTATGA

Transcript

OFRAG00000001981.1

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	TF_bZIP
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00170	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan
PF01263	Aldose_epim	Aldose 1-epimerase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR008183	Family	Aldose 1-/Glucose-6-phosphate 1-epimerase	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR014718	Homologous_superfamily	Glycoside hydrolase-type carbohydrate-binding	Interproscan
IPR025532	Family	Glucose-6-phosphate 1-epimerase	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR051381	Family	cAMP-responsive element-binding ATF subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45996	AGAP001464-PB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016853	Molecular Function	isomerase activity	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-