Detailed information of OS493_008716-T1 in Lophelia pertusa

Genomic Location: scaffold_20:3428167...3429338
NR annotation: KAJ7386572.1, hypothetical protein OS493_008716 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P45448Nuclear receptor subfamily 5 group A member 2 OS=Mus musculus OX=10090 GN=Nr5a2 PE=1 SV=3
Q9QWM1Nuclear receptor subfamily 5 group A member 2 OS=Rattus norvegicus OX=10116 GN=Nr5a2 PE=2 SV=1
Q90YL6Nuclear receptor subfamily 5 group A member 2 OS=Danio rerio OX=7955 GN=nr5a2 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001723FamilyNuclear hormone receptorInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR033544FamilyNuclear receptor subfamily 0 group B member 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24081NUCLEAR RECEPTOR SUBFAMILY 0 GROUP BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0043433Biological Processnegative regulation of DNA-binding transcription factor activityInterproscan

Expression pattern
 Expression trend for OS493_008716-T1 global co-expression network
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