Detailed information of OS493_013569-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_013569-T1ZINC FINGER PROTEINscaffold_3715321561532821-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24394ZINC FINGER PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_013569-T1 global RNA-seq network
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