Detailed information of OS493_017930-T1 in Lophelia pertusa

Genomic Location: scaffold_58:967996...970725
NR annotation: KAJ7372658.1, peflin or Penta-EF hand domain-containing protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75340Programmed cell death protein 6 OS=Homo sapiens OX=9606 GN=PDCD6 PE=1 SV=1
P12815Programmed cell death protein 6 OS=Mus musculus OX=10090 GN=Pdcd6 PE=1 SV=2
G3V7W1Programmed cell death protein 6 OS=Rattus norvegicus OX=10116 GN=Pdcd6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF13202EF-hand_5EF handDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051426FamilyPeflin/Sorcin Calcium-BindingInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46212PEFLINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

Expression pattern
 Expression trend for OS493_017930-T1 global co-expression network
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