Detailed information of OS493_020914-T1 in Lophelia pertusa

Genomic Location: scaffold_79:60838...62233
NR annotation: KAJ7390894.1, hypothetical protein OS493_020914 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49033Myc proto-oncogene protein OS=Hylobates lar OX=9580 GN=MYC PE=3 SV=1
B8XIA5Myc proto-oncogene protein OS=Macaca mulatta OX=9544 GN=MYC PE=1 SV=2
P01108Myc proto-oncogene protein OS=Mus musculus OX=10090 GN=Myc PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF01056Myc_NMyc amino-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR002418FamilyTranscription regulator MycInterproscan
IPR012682DomainTranscription regulator Myc, N-terminalInterproscan
IPR050433FamilyMyc family transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45851MYC PROTO-ONCOGENEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04377MYC; Myc proto-oncogene protein-Messenger RNA biogenesisko03019deepkoala

Expression pattern
 Expression trend for OS493_020914-T1 global co-expression network
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