Gene detail

Detailed information of OS493_038530-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_038530-T1	ADHESION G-PROTEIN COUPLED RECEPTOR	scaffold_612	40215	57168	+

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_038530-T1

ATGAAGACAACTGAATTTGCTTGTTGTGTGCTTCTGATAATGTTTCTGCAGAGCAAAGGAAAGGCAGGTAATCTTCGTATGATCAATTCTGCTGCACATTACTGGCCTTTAAATCGTCTTCACGGCATAACCGATATAACAACCAACACCACTGGAGTCAAACATGGTAAAATCGAGAACATTCTCTACAAAGGGCCTGGAAACGGTTTTCTTCATACGGATGGTAGGGCCTGGGTCGACCTAGGGAACTTCACAGGTTCTTGTTTGGCAGAGCCTGGAACATGCAAAGACGCATTGACGGTTTTTCTATGGCTGAAATATACTCCAAACAAGCACAGGAGATACTTGTTAGGTACTTCGAGCCATCTTACCTATACAGAAGGCTTTACAATATATAAGGACGCCGCTAAACAAAACAATACCATTGTTGTAAGAGTGAATAACGGGCAGTGGGAATGGACAGGACGACTAAACCTTAAACCGGACGTCTGGTCGCACGTGATGTTCACGTGGGAATATAAGTCAGGACTAGCATTATTCCAGAACTGCAACCAGATGGCTTTGGTCTGGAATAGTGAGTCAAAAACGTCGACGAGAAGCAACCGATCAAATATTCTAGAACATCATTTGAGTCTGTCTGGAACACAGAAATTCCAACCTGAAATGGGCGTTAGAGCGTCGTACGAAGATCTTACAGTACTGTATCGAAAGATGGAGAGTCATGAGAGGAATTGGATTTGCCTTCACAAGTTAGAGGCACCGCAGATAAACTCCACCTGCGAAGGTTCCATGAGGTGGCTCTCAATCAACTGGAGTCCACCTCCGATGACGTACGATATATTAACAGGGTACAATGTGTGGTACTGGGGCGACTCCTTTTCTAATTGGACAAAGTTGTCAAAGGGAACCGAGAAAACGACACTGAATCTGACTGAGCTAGATCCAGGATCGTCGTATAAATTTCATGTTCAAAATACTTTCCGTTTTGGTTCAGGGAAATCGAGCCAGATAATTGAATGCAGAACGAAAGCTGAAGTTTTAGACCCGCCACTAAATTTAACTGTGGAGATGACGTCATTCATTAGCATCCTATTAAAATGGAATGCACCACCAGATAGTCATGAAGATGTTAAAGGATACAAGATTACGTACAGCGCAGCAGATTCTGATACGAAACCCAACGAAATCAAGGCGGGGCCTATGACGTCATTTCTCCTTGCTGGACTGCAGAATGGTACCAAGTACAATGTGCAAGTGTCGAGTTATGGCGATAAACGGTTTCTTGACAGTGCTGCAGCAATGACTACTGTCACGACAGATAATGATGATAAGTCTTCAGTCAAGGAAAAATCTCTAGAAGTGACAAAAGCCCAGGCCCTAAGGGTCACGTGGAAAAAACCACATGATAAATACACGGAGTTTTCCTATAGAGCGTTTGTAAAATGGAAGGATCTGGAAGGAATAGACAACATGCTCGAGGTGTATAATGGGAATGCAACGTCTTGTGTTTATTCCATCAAGGAAATTTCATACAGTCACACATTTTATGTCATGGCGTATGTGGTGCGACAAATTCCTCTCCGCCCAGTTGTTGCGACTGAGACGCATGCTCGCATTGATGGCCTGAAACCGCTGACCACCTATTTGTTGAACGTGCAAGCTGGGAATGATCTGGGAGACGGTCCATTTCTAGCTGAAGATATTCCCTTCAGAACGCCAGAATTACCAGAAGGATTGGGCGACGAGTACTTCTGCCCTGGCGAACATTTTGCTGACATTGAATGGAGGAGGACCTTGGTGAACCGCAAAGAAGTGACGGCTTGCCCTGAAGGAACTATCGGGGAGGCCTCGAGGCACTGCACTGGGACGCCCGCGGACTGGGAACTACCTGATTTAGGTGACTGCGTTTCAAAATGGATGTTAGACCTAAGCAAACAGCTAAATAATCCAAACGTCAGTGTATCTTTAGTAGCCAATCAACTTTCGAACCTGACTGACGTCAAGTCTGGGAAACCCTTGTATGCCGGAGATCTGAAATTACTGGTCGATGTCATTGGCGTGTTATCGCGGAGGGGACTTGGAACTAGTCAAAACGAAAGCTCAGATGCTTCGGAGTCATTCGTAAAGGATTCCCAAACAACGAAAGCGAGTTCTCTCATTGATAGTCTGGATGTGGTAGCTTTGGACATGGCGAATTCCTCGCAGCCTAATGCTGCAACCGAGATGGACAATGTTGTGATGAGTGTGAAGTCATTGGAAAATGTGAAAGGTCAAGAAGCCCTCTTTATGTCGCAGCAAGATGAAGGAGAAAAGGCGTTAATGAACGCAGTGTCTTTTCCCGCATCTGTGTTAAGAGGAGGTGCTTCCGCTGATTCTAAACCTTCGTTTGCCACGCTTGTCTCTTACAAAACTCTTGGACCCTTGCTAACACCGAGAGGAGTGAAAAGCAAAGAGAATGGCCAACAGATAGAACAACCATCTATAAACTCAGCCATCGTATCCGTAAATCTTCGTCCACTTGCCATGAAAACATTCAAGGATGCCGTGGTAATAACATTACGTCACTCGGTGGATAGCGAAGGAAGCAACAGTAAACCATCATGTGTGTTCTTGGAGACAGACAAAAATGTAAGCTGGTCTGAAGCTGGGTGTGAAGTGCATTCAACCAATACGACCCACACCGTTTGTCACTGCTATCATCTCACAAGCTTTGCTGTTTTGATGAGCGTTAAACAGGACGTGTCTACTATATCAAAGGAGCATCAACTTGCTTTAACTCTTATCACTTACGTTGGAGTGAGCATATCTGTGGTGGCTTTGATCCTGGCGTTCCTCACATTCTACTTCTTTAG

Transcript

OS493_038530-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF16489	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000203	Conserved_site	GPS motif	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR032471	Domain	GAIN domain, N-terminal	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036445	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_038530-T1 global RNA-seq network