| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf2100_9.2 | ISTHMIN-2 | Superscaffold1 | 42889396 | 42911356 | - |
| CDS | |||||
| PE_Scaf2100_9.2 | |||||
| Transcript |
| PE_Scaf2100_9.2 |
| Protein |
| PE_Scaf2100_9.2 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF06119 | NIDO | Nidogen-like | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR003886 | Domain | NIDO domain | Interproscan |
| IPR005533 | Domain | AMOP domain | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR051867 | Family | Angiogenesis Inhibitor and Adhesion GPCR | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10239 | ISTHMIN-2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf2100_9.2 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
