Gene detail

Detailed information of PE_Scaf3941_1.6 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf3941_1.6	PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	Superscaffold8	56469692	56472953	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf3941_1.6

AGGTGTTTCTGGCGTCAGAGGCAGACCTAGACTAACGCGGACGACGACGACAACCGATGGCGGATTCGACTGTGTGGAGGCTGACAACGTATAATGTGGCCACGACGCAAGAACCGCGCCACTCTGGCGTCGTTCCTCTGCTCCGCCTTCGTCATTCTCTTCCTCTTCGCCAACCTTTTAATCCTTCACGGCAGCTTCCGCAATATGTACGACAGCACGTTATCGAGGCGCACATTCGCTCGCCGCATCGATTCCGCCACCGACGAGACAGACACAGTCCAACTTCCGGCGTACGTGTTGTCACCGGAAGTTCGCAAACGACAAGTGACCGGTATCAGCAAAGGCGTCGTTGTCGACGGTTTTGATGACGTTGTCGTGTCTCTCACGACGACAGACCTCCGACGGATCCTCTCGCAGACGTCTGACTGTGAACGAATGCAAAATATGTCGAGTGTAGCTTTCATCGCACACGGCTGGAACAAAGCCGTGTATAGGACTACGCTAGACGGAAGTGACGTCGCAGTTAAGATGGTGGATCTCGGGTCTGAGTTGATGGGTCGGTGTCTACAGGAGCAGGGACTCGGACAAAAACGTTGCTATGATAGGGCGTCTATGTATCTGTTCAAGGAGCTGCTGTTTCTACGAGCTCTCAAACATCCACACGTTGTGAAGGTGAGTTACCCTGCCCGTGCATGTTGTACACCAATACAAAGACTCGATGTTAACGTCCTTAATCTATCGTGCCGATATCACAGTAAACATAATCCCAGACTAACATCAACATTATGCATTACCTGTAGTGATACAATATCTTTTGTGACAACAAATTCCGCTATAAGGACATCGTGAAAGTAAAATAACACGTATCATAAAAGGTGACATATCGAACCGCTTGTCCGCTTGTTGTAAAACTATTCGGTGAGCAAATAGCTCTACTAATAGCTATTTTAATAAACAAGTAAGTAGTTGAGGGAATAGTACCAGATGAATTGAAAATAGCGAAAATTATACCTGTCTATAAGTCAAATGCTAAAGATGAAATGTCTAATTATAGAACCATATCTTTGATACCCTTAATTTCTAAAATACTGGGAAAATTTTTACATAAAAGGACTTGTGATTTTATACCAAAAACCAAAATATTGAACAATAACCCATATGTTTTTTTGTGAAAAACATCCAACAATAAATGTTATACGCACTTACTAGTGATGTCATAAAAGTTCTGGAAAAAAGACTCGGTCCTTAGCATTTTCCTGGATCTGAGTATAGCATTCGATACAATTGATCACCAAATCTTATTACATAAACTTGAATACTATGGAATAAGGGGTACTCCAATCAAATGGTTTAAGAGTTATCTCTCGAACCGGAAACAATAAGTTACATTCAATAATAATGATTCGCTTCAGCAAGATATTACATACGGTGTCCCACAGGCGACCATCCTCGGTCCGCTCTTGTTTATTTTTTACATAAATTACCTTCCTTTTTGTATAAAAAAAAGTGCAAAACTATATTAATTGCTGATGACACTACTATATACAAGATTAGAAAACAAATAAATAATATATATGAAGATATGACTAACGAACTTAACGTATTGGCTGACTGGTTTCATGTGAATAAATTATCTATAAATATTTCCAAGAATAAAATGCGTGTTATTCAGTAGATCCCGTCCTTCTCAGAGTGAAGAATTACTCTTATCAATGTCTAATAAAATAATTCAGCATAGAAAATGTGTAAAATTTCTAGGCCTTCATATTGATGACAAACTTGATTGGCAGGAACACATAAATGTATGCATAAATAAACAAGCCAGTGCTTTATACGCAATTAATAACATTAACCGCCATCTTCCTGTTTCTGCCCTTAAAACAATGCAATATACTTTAGTTTACCCCCACTTGACACACACTCATTTTATGGGGATCCACTTACAAAACTCATTTCACAAAATTATTTATTATGCAAAAAAATTGTTCGTTCCATACTTAAAATAAATTATTTGGAACACTCGCATCCCCTCTTTATGTGCCTAAATTTTATAAAATTACAAGATATATATATATGAAATTGAAGTTGGAAAATGTATGTATAATTAACGGGAGTCTACCAAATACTTTATCCAATATTTCTACATTTACATGTGACATACACACACACGGAACTAGACAAACTTCGCATATACGTTCTTCCACAACTTCTACTGTAAGATTGTCAAACAGTTTGTTATGTAAAGGTCCGTTGATCTGGAATACAATTCCAACTATCACTCAAAACAAAAACAACCTACACAGTTTTGTATTATCACTAAAACCAATTGTTGTAAATGGGTATGAAGTTCTACCAGAACCTTAATTCATTACGAAACACACGTTCATATGTGTAATCATACCCTATATATTATCAGTAGTTGGGATCACCAAATGTTTGCTATACAATTTAATTTAACATTTACTATTTAATATTGTTTTTGTTCCATTTTACATATCTGGTCTATTATACAAACTTTATCAACATGTTACACGTGAAATTGTTATTACATTGTTTATACAACTATTTGTGTGTTTGAGAGCGACCAGTTCATTTAATAAGTAGGCCTACTTATTTTATTATTATCAATTAAACCAACTGGTTACAACATTAACTGGTTCCGCCGTCAGCCTAGAATCGCAAATTCTATCACCGATTGTTATACTTGTTTGATTATTTTGTATGTATGATTTATACTATTCCAAAAATAAGCCCTATATATATAACCGTTGACTTAATATCAGGAAAACATAACTGATTATGTTGTACTTTACTAAAAGTATATAACATGTGTAGAACATGATTGAAGACGTTAGTGTGTGCGTATTGTTTGTGTGAATGTGTTTAGGAAAATACATCATACATACATATGTTAATCACCTTATGTGTAACCCTTCAGGTGTTGGGTTCTTGTGTCACATCGTCTGCCTATGACGGAGGGCCGGACACGCTGGTGAAAGTAGCGACAGAACTAGGCGAAACTATCGATCTCATCCGATTGCTTCAGATGTCGTGGGAAGATAGGCTGAGAGTAGGTACACCCTCACTCATTCACTTACTCTGCCTACATACATTGAGGTCGCCGTTGGTTTCCCGTCCCCTCCTTCCATCACACCTCCCGCTCTCTCTCTCTCTCTCTCGCTCTCGCTCTCGCTCTCGCTCTCGCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATATAGCACATGTTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR042983	Family	Extracellular tyrosine-protein kinase PKDCC	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46448	PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001501	Biological Process	skeletal system development	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004715	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0018108	Biological Process	peptidyl-tyrosine phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf3941_1.6 global RNA-seq network