Detailed information of PMEG.utg000047l.25 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000047l.25HISTONE DEACETYLASE HDAC1-RELATEDchrom056101975361032420-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000286FamilyHistone deacetylase familyInterproscan
IPR003084FamilyHistone deacetylaseInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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