Gene detail

Detailed information of Paelopatides08278 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides08278	DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN	ctg18054	15393	44540	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides08278

ATGGCCGATTTGAATGTATGGGTGATCGTTGAAATCACGTGCTTGTGTTTATTGTGTGCTATCGGCACTATAGGAAACTTACTGGTCATCCTAGCAGTGCTGACCACACCAACTTTGAGACAGCGATCCAACTTTTTCATTGTGGTATTAGCGATCTGCGACCTGCTCACGTCCGTCGTCCTGATCCCATTTTACGCACTGACTTTGATATATGGACACTGGCCCTTTCATAACTTTTGGTGCATATTTTTAGCATATGTAACACTGTGGTCCTTGGGGTGGTCTGTCACGACACTCGCTCTAATCGCTGGCAACAGGTATCTCAGTATAACACGACCAAGGTATAACTACAACAAACTGTGTAATAATTTGAGTTTAGCCGTCTCCGTCTTTGGGCAATTTATATTAGGATTAGTCTTCATAATGCTTCCTCCGTTTATCAACATCGGATCTGTCGGATTTAATTCAACTCTTGGACATTGCTCGTACGTCTACGACAATTTTAAAGACTGGATCTACGTGCTCATCCTCTTTTTGGGCGGGGTGGTCTCCACGACCTTGGTCTTACCGTCGTACTACGCCATGACGTTCTACATAGTGAGGAAAAGTCGCTTAAATATCAGTAACGGTCGACAGCGATCTCTGTCCTCTAACCTGAATGAGAGAGCATCCAGAGACAATGGAAGGTTTGCGATTAGCCGAGACGAAATCAGACTGACCAAGAAACTGCTTTTATTATTTGTGGTATTCCTCTTCTGCTGGCTGCCATACTCTATGGTCGTTTTCTTGGACAGCGGTTTATCGGTATCCATCCCGGCACAGCGAATAACCAACTTTCTCCTGTGGAGTAACTCTGCCATCAATCCGTTCCTCTATGCGTGGATGATGCGGAGGTTCCGTTTGGCATACAAACGACTTGTAACATTTAAGTGCTTTAAAAGATGTCGACAGATAGCCGAAAATGGGGGCAGCATTGTAACAGAAGCGAACATAGGAGAACAAATCAAAGAATGGGTGGATCAGGTCAGCGCTAAGGGGCTTCCTTCCTCTGCCGAGTTTTCTCTCATCAACACCCTCGGTGATCAAGTACAGATCAGACAGTGGAATATTGCTGGCCTCCCGACAGACAGCTTCTCCGTCGAGAATGGAATCATCATCAGTAATGCCAGAAGATGGCCGTTGATGATAGACCCGCAAGGTCAGGCCAATAAGTGGATCAAGAACATGGAAAAAGCCAACAACCTCCACATCATAAAACTAACAGACGGAGACTTTGTCAGAACCTTGGAGAATTGCATTCAGTTTGGAACACCTGTCCTTTTGGAAAATGTTGCCGAAGAATTGGATCCAATCCTGGAGCCGCTCCTGCTGAAGCAAACCTTCAAACAGGGCGGGGCCATTTGCATTCGCCTCGGAGATAGCACCATCGAGTATTCACAAGATTTCCGATTCTATGTGACCACTAAGCTGAGGAACCCTCATTACCTTCCAGAGACATCTGTTAAGGTAACATTGCTGAACTTCATGATCACCCCAGAGGGTCTTGAAGACCAATTACTTGGGATAGTGGTGGCCAGAGAGAGACCCGAGCTGGAAGAGGAGAGGAACGCACTTATTCTGCAGACTGCTGACAATAAGAGAATGCTGAAGGAGATAGAGGACAAGATTCTAGAAGTTTTATCTTCCTCCGAGGGTAACATCCTGGAGGACGAAACGGCCATCAAGGTCCTCTCTTCATCCAAAGTGCTCTCCAACGAAATCTCTCAGAAGCAAGCCATCGCCGAGGAAACCGAGATAAAGATAAACGTGACCCGGCAGGGTTACAAACCAATCGCCGTCCACTCCAGCATTCTCTTCTTCACCATCGCCGACCTGGCCAACATTGAACCCATGTACCAGTATTCCTTGACCTGGTTTGTAAACCTCTTTGTAAATGGCATCGAAAATTCAGAATCTTCAGACGATCTCAAGAAGAGGTTGTTCAACCTGAGAGAATTCTTCACCTACCTACTCTACTGCAATGTATGCAGGTCACTGTTTGAGAAGGATAAGCTTCTCTTTTCATTCGTCCTGTGCGTCAACCTTCTCAAGCACACCAAGGAGGTTGACGAGGATGAATGGAGGTTCCTTCTCACCGGTGGCATCGGTCTAGAGAACCCCCATTCTAATCCAACCTCTTGGCTCCCTAAAACCTCCTGGGACGAGATCTGTCGTCTGGATGAACTGCCCCACTTCAAGGGCTTGCGTAAGACGTTTCCGGCACAGAAGGAAGGATGGAAGGTCATCTATGACAGTGTGATAAATTCCAAATACATGCTAGGTTGTACTAAGAAATAG

Transcript

Paelopatides08278

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF12781	AAA_9	ATP-binding dynein motor region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR026983	Family	Dynein heavy chain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035706	Domain	Dynein heavy chain, ATP-binding dynein motor region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46961	DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030286	Cellular Component	dynein complex	Interproscan
GO:0045505	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959	Molecular Function	dynein light intermediate chain binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-