Gene detail

Detailed information of Paelopatides12879 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides12879	PROTEIN CBG26694	ctg24655	67960	107164	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides12879

ATGCGAATTTCTCAAACGAAATGTATGGAGTACCATGGTCATAGATGGATAGTCAGGGGTTGCATGACACAGAGAGGAAGTCAAATCCATTCTGGAAGCACCAAAGCCACACAATGTTGTGGAAGCCAGGGCTTTCTAGGTTATATTAATTATTATGACAGATTCTTAGAACACTTATCAACGACCCTACAACCACTGAATGAGTTGCTTAAGAAGGAGCAGCAATGTGTCTGGACATCTGCATGCAAAAATGCATTTGATATGTGTAAGAGACAGCTGGCCAGGGATAAGGTTTTAGTTCACTATGATCCAAAGAAGCCGCTTCGCCTTGCATACGATGTTTCACCCTATGGTATGGGGGCAGTCATCTCTCACATATTCCAGAATGTGCCTCCAACGGTTTTCATAAAAGTTAATGGGAATGAATATTTTCCACATGACACTGTCAGTGACACGAATAACTTCGTTACACATTATGTCAACGCAAAGGAGACTTTTACAGCCGAATGTTACGCAATCGGCGCAAAACCAGAACTCCAGCTTTCATGGACGGTGAACGATAAAAAGGTATCTTCATCAACAGTGGACATTAACAACGATACACGCAGTAATTACACGTTCGTGGATATTAAGGTTGTGTTAACGACATTGCTAGTGGAGGACCGAGGAAGTATTAAATGTACTAGCTCTGGCCAAAACATAACAGAGTACAGACTGGAGGATATTAGTATTATATTTCACTACATGACATACGCATGTCCTAATATGACACTGAGGATCAATGGAGAGGACATTATAACTGCAGTTGATGTTAATAGACACGTTAAAGCAACGGCTACCTGTAATATAACGAAACCCACACTACCATCGCAAGCACAATGGAAATTTGACGAGAGAGATGTTGAAATACTAAGCGAAATCCATCCATATGACACTACTGGTGGTACCAGTATTGCAATGAAAATGTATTTCGTACCACGGTTGGATAATGGAAATATCGGATGTATATACACAGGGATCGGCGGTTGTAAAATCCAACAGATTGCAACATATGTAATAAGAGCTACTCGCAATTTTGCCATTACAAGTGCTAATTTGCCCAACTTACCAAATGAGGATAACATTTCTGAGGGATCTGATGAATCAGAAAGATGGGGGAACAAAGAGAGTCGAATGTATACTGATAAAGATATTTGTATAATCTTGAAAATGAAAACGGACCAGTGGCGTAGCAGGTGGATGGGTACAATAGAGTCCAGAAAAGAAAACAAAATGCGTTGTGCTGACTACAATCAAATGGTTCATAAGAAACACATTCATTGGGACGAGTTTGTTAAGAGAACGCTCGACTTACCCTCAACGAGATACCATGTGAACATTGAAGGCATTGGCGTAATAAAAGGTCAACTTCATTTAGTACAAGAGCATGTCGCTTGCGAGACTCTCGAACGTTGGATTATAAAAATATTTATCCAGGGGGAACATGACAATAAAATACACCTGTCTGATGTGATGAGAATCATAGCCGATATCCTAGAAGGAATGAATCTCATTCATTCCTACGGGTTTCTCCATCCCGGCTTATCAAGCAAGAAGATATTACGTAGTGATAAAGGACAATGTAAACTCTACGATTTTTGTATATCCAAAGATGCACCAACAGTCACGTCATTTAGAAAAAGCAAGATGCCGTATTCCTTGAATAATTTCCCGCCAGAAGCCCTGTTTTGTAATGAATATTCACAACCTAGTGACGTATGGTCTGCAGCTGGTGTAATTTGGGAAATCCTTACTGGTACATGTCCGTTTCCATGTGAACAAGATGGTATAACATTTGGAGACCATCCTGACGCACCTTCAGATTCCCAGATTACTCACTATGAACAAATAAGAAACAAGCTTCTTTATCAGTGTTGGCATCAAGTCTGCTCTCATCGTCCCACTGTTCGTGAGCTCATGGAATCTTACCAAAAGATTTTCGAATCCTTAACAGATGTCACGTATGAGATTCCACGCATTAACCTATACACCTCTGTGGTCGACAACCCTGATATTTATACAGCAGTAACATAA

Transcript

Paelopatides12879

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-