Gene detail

Detailed information of Paelopatides16012 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides16012	EPM2A-INTERACTING PROTEIN 1	ctg307	146684	227617	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides16012

ATGAGAGCTTTGTCCCCATTGGAACTTTATCCTAATTCTGAGAGTGTATCTTTATTTTCTCCTGATCCAACAATGCAAGATGACATGCTTCTGGATAAATCTGCTGGAAAGCATTTGCAGCAGCTGTCGCCCAGTAATGACTTACTACTAGGCTCTGAACATTCTGAGGATTTGTCGTCCTTGTCTAAATCAAAGTCGGGAGATTCTAGCCCTCTCACTGTACCTGAAAAGAAGGGCTCGAGCCCTTCACCAGCTACTTCACCACCAGTTCTTCATAGTCATCATACGCAACCACAGTACCACCACCACCACCACCAGCACCAGAGTTACGACTTCGGCCCTCAAGATACTCTGGGGTATCCAGGCAGGAATAATGCTGCCTCTAGTTCAGTGCCAGCTACCAACCTCTGGTCAGGACAAGCCAGTGAGGATCCCATGATGCAGAGCATGCCAACTATGAATGGTGCTCTCCAAATGCAAAACATTCCTCTGACCTCTTCTTTCTTCAACCCTTCTCTTGCTCCTCCAATGAGTCTACAACAAGCTCAGCGACGAAGCCTCCCCCCACAGCCTAGCCCCAGTTCACAGCAGACATTTATGACAACGCAACTGCAAACTCAGGCACAGCTTCAAGCTAACAACCTGCTACTACAAGGGAATAAACACATGAGCTGGAATGGTAATCAGCCACAAGGATGGAACTCACAGCAACAAGGTCTTGGCAGCAACCCATGGGGTAGTGTCGGATCACCCCCGGCTACCTTTCCAAACCAGAATAGAAGATCAATGCCACCTCTCACCACAAACACACTATCCCCAACCAAACCAAGGTCTCCTACAAACCCAGTGATCTCGCCTCCCAAGTTCCCACGAAGTTCCAATACGTCAATGCTTGGCAGGAGTTACTCTCCCCAGCAAGCTTTGCAGAATAGTATGGGATCTGTGCCTAATACTGCCTTTGACTTTTCAAGACCTGATGTGAAGCGCTACGACAACATAGGTGGTAATAATGGGAATCCATTCTTTCCATACCAGGAGACTCGTCCTAGCAATGGTACCATGGATCCAATGAAGATGACCGCATTGGAAACACAATTGCTGGATATTATGAGAGCTAATGCTGTGGGAGATATGAGGAGCCCTTGGCCTTCATCATCTATGTTCCCGTCTATGGACAATTATTTGGATGAGAACAACCATGATCAAATTGTTCCCTCTTTGAGTTCACCAGGCCAGATCTCTCCCAGATCCCCCACAGACTATCTCCCAGAGAGGTACTCAAGGAAGGTCTTTGTGGGTGGACTGCCTCCAGATATAGATGAAGAGGAAATTACAGCAAGTTTTCGACACTTTGGAAGTCTTGTTGTCGATTGGCCACACAAAGCTGAAAGCAAGTCATATTTCCCACCTAAAGTGTTGTGTGCCTCCCTCGGCGATGAGTTCAAAGAGGCCATGACTACTATTATGAAACTGGTCAACTTTCTGAAAAGCACATCAGCCCTCCAACATCGTCAATTAGTGGGAGCTGAGTATGATGATCTTTTGACACATAACAATGTAAGATGGTTGAGTAAGGGACGAGTTCTTGATAGATTTTGGAAAATTAAGGAACATTTACTAGCTATTCTAGAACAAAAACCAGATGCAAATGCTACTCGCTTTGTGGATATATTAAACGACGAAGAGCAAATGACAATCCTTGCTTTCTTGACAGACATTACTAGTCACTTGAACAGTCTGAACAAATTTCTCCAAGGAAAGGGACACACAATATCTGATCTTATGGCAACTGTCCGTGCTTTTCAGCGTGAACTAGATTTATATAAGAGAGACTTGGAAGCAGGACATTTTGTTTTCTTTGATAGGTTGAAACAGAATGGATGCAGTGATGATATCAAGGAGAAATGTATTGGTTTCATGACCATGTTGATTAGTAACTTTAAAACTAGATTTGATTCGTTTGATATTGAACGTGTATTACTGGATGGCATTGGGGATCCTTTTTCAGTCAAGGACGTGATGACCTTTAGTAAAAGCGCATACAAATCATTCTCTGCAGACATCGCAGCTGTTTCAAAGGAATTACTACTAATTCAAGAAAAGTTATCAAAGCAGAAAGAACATAATTCCGTGACATTTTGGACTTCAATTGAGGGACAACTTGCCCCTGTACTGAATGACATCGCCGCTAGTGTTCTCAGCATGTTTGGATCAACCTACGAATGTGAAAGTGGGTTTTCCACAATGTATTTTATTAAGAGTAAGAATCGTTCAATGCTAACTGATGATCACTTGCATAAGAACATGCGGATCGCTTTAACACCAGAGGAGTCAAACTTTGCAGCCATGGCAAAGAAGTGA

Transcript

Paelopatides16012

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05699	Dimer_Tnp_hAT	hAT family C-terminal dimerisation region	Domain	Interproscan
PF16367	RRM_7	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR008906	Domain	HAT, C-terminal dimerisation domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-