Gene detail

Detailed information of Paelopatides19736 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides19736	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	ctg39579	4907	18715	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Paelopatides19736

ATGTCATGGCCGGCCGTTTGTTCTTTGGTTATTTTAGAACCACCATTCGTGATTACTGAACCAAGGCTAGCTGTTTCTTGGAATGAGGTCACACTTACTTGGACTCCACCAGAGGGTGTTATTGGATACACTGCTGAAGTTATCTCGGAAGGTGCTCTCTCGCATATTATTAGGCTATCCCCAATTGCAGAATCTTTCAGTACTACCCAAATCCATACTGGGGTTGAATATGCCATCAAGATCACACCCATCAAGGGTAATGGACCTGGTGACGCCTACACTACCGATCTCTTCACCCCAGAGTGTCCTACTTTCTGTATTTTCCTATATGCTCCTGTGTGTGGTACTGATGGGAACACATACAGCAATAAGTGTGCCTTGGACATCGCTCAGTGTGAGAGTGAAGAAGATATTGAAATAGCCTCTGAGGGAGCTTGCGATCCATGCGAACTCATCCAGTGTTCTGTTCCTATCTGCCCCCCTGGCTACAAGCTTGGGGATGACCTCCTCCCCGGAGAATGCTGTTTAGGCTGTGTTGATGTATGTGAGGGTATCCAGTGTCAGCCACCAGTATGTGATACTGGTTATGTTGTAACTCATCTTGAAGGGGACTGCTGTGATAGTTGTGAAATGCAAGATCCATGCGAACTCATCCAGTGTTCTGTTCCTATCTGCCCCCCTGGCTACAAGCTTGGGGATGACCTCCTCCCCGGAGAATGCTGTTTAGGCTGTGTTGATGTATGTGAGGGTATCCAGTGTCAGCCACCAGTATGTGATACTGGTTATGTTGTAACTCATCTTGAAGGGGACTGCTGTGATAGTTGTGAAATGCAAGTATTCAGTGACTGCGGTGATGCTATGGACAATGGTATGACCGAGAATGGAGTCTACCGGATTCAACCACTTGGTATCGATAGTGCCTTTAGTGCTTATTGTGATATGGAGACTGATGGCGGGAAATGGACTGTTATGCTACGTAGACCTAATTCGACAGTGAACTTTTTCCGGGATTACGATGAATACGTGGAAGGATTTGGTGATGTTACCGGTGCATTTTGGATTGGTTTAGAGAAACTCTACAGGTTGAACAAACAAGGCAACACCGAACTGCTCATCTCTGCGGTGGATCAGCGCGGTTCGTCTGCAGCCGCTAAATACAGAATATTCAGGCTTGGAGCAGCGGTAGATAAATACCCTCTGGAGGCTATCGCTGGCTTCACAGAATTTGTAAAAGGAGACACTGGTATACTTGGAAATGGTATGTTTTTCAACAAGGGTGCCGCCTTTTCTGCCCGTGATCAGGACAACGATCTCTCCACCCGTGACTGTGCTGGCGAACTTGTTGGCGGTTGGTGGTACAAGGGAGGAATGTTTCTAGGACAAACCCTCTGGGAGAGTATTTGCAACCGGATACTCGTAAATACGAAGCAGGAGTATTCTGGGCTCCATTCAGAGGCAAGCAACATTCCCTCGAATTGCTTGAGATGAAAGTACGAAATAGTGCATAGCCGAGATGTCATGTCCCAGAGAACTGTTTATATATCTACGATACTGTCATAGAGATGGTTTATATTTAGCTAGTAGAATTCAGCAGACTGTCAATAAAGTACAATATGGGTACCCATTCGAAAGTACAATATGGGTACCCCTTAAAAATACCACATGGGTACCCCTTAGAAAGTACAATATACCCACGGGTACCCATTAGAAAGTACCTTATGGGAAACTCTTCGAAAGTACAACATGGGTACCCTTTAGAAAGTACAATATGGGTACCCCTTAGAACGTACCTTATGGGAAACCCTTAGAAAGTACCATATGGGTATCCCTTAGAAAGTACCATATGGGAAACCCTTAAAAAGTACCATATGGGAAACCCTTAAAAAGTACCATATGGGTACCCCTTAGAAAGTACAATATGGTAACCCATAGAAAGTACAATATAGGTACACCTTAGGAAGTACAATATGGGTAAACATTATAATGTACAATATGGGAACCCTTAGAAAGTATGATGACAAATCTGTAGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-