Gene detail

Detailed information of Paelopatides20102 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides20102	HEDGEHOG	ctg4062	171472	186503	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides20102

ATGGCTATGAGTACAACACATAGAAAAACTTTAGACAGGACCTTAGAGGTCCTGGCTGAGGACCTGGATGTCATGTCTGCAATTATACATATGAAAAGCAAAGAGATCCTTACAGAATTAGACGAGGAGAGGATCAACGCTAAAACTACAGAGAAGGCAAAGGTCATGGAATTTGTAAAACTCACCAAAAAGAGAGGGAGCAGAGCTTATCCAGTTTTCAAAGGATACTTACAAACTTGCCAAGGCTCGGAACATCTTGCAGAAGAACTGGAAATCAATTTAAAGGCCGTCGAAGCAAAATTGCAGGGGTTGACGCTGGAAAGAGATGGAATGGAACAAATAGGAAGATGGAATGCCTTTGAAGAGAAAGTTCACTACTTTGACTGCGAACATGAGAGTATTGATCAGTATCAAGATATCCCTGACGAGATCAATATACTTTTGATTGGGAAAACTGGATCCGGATTTCAAAATGAAGATTTATTACTTGAAATAGCAAAGACCATGGTGAACTTTAAAGGCGGTATCCATCTATTTCTGCTGGTTTGTAGCTCTACAAGATTCACTAAAGAGGAACATGAAACTATACAGGTCATCGAGAAAGTACTGACCAAGAATTTTTACAACAACTGTGTTCTGATTCTGACCAACGCATTTGCTCAATTTAGCGGTACAACAAAGCCTTCGTTGCGAGATTATGTCACACTAGAAAAGCGTAATGGTCTAGAGTTTGCTGATCTCCTAAAGCAAGTAAACGATAGAATATTAGCTGTCGAAAATTGTTTTGAGGACGAATTCTTGAAAGAAAAACAACGCCAAAAATTTCTGTGCAGTCTTGCTCAGGTAATTTATGATAACAAGGGATCGCTGTATAAGAACAAAATACTTGAACGAATCGAGAAGAAAGTCGATCAACAAGAAGCAGACAGGAAGAAAAGAATCGCCACGCAAAGAGAAAAAGTTAAAATGAGAAAAATATTGCGTAAGTTTCTTCTACAGAAGTATCTCAACAGTTTATCAGTGAAAAAACTCGACAACATACTCCCGATATCCAAGAACACAACACAACACATCATGCTAGACTCTGGCGTAAAACAACTTCAATTCATTACGACTGCAGATGTTCAGGCATACCTGGAAAACTTCATCAAAGAAAACAAGATGCTGATCAATCCCATTAGAGAAGCTAAAATTCAAGAATCGAGACAACGGGAATTTAACAAAAGAAGACGAAAGAAGCTCAAGAAGAAGGAAGATATTTATAAAATGCAAAGCATTGTGTTACCGTTGGTGAGTAATTATTTGCAACAGCAATCCAAAGAACAGTTAGCAAACATAATAAAAAACAAAGCACTACCTGCTCATGAAATGGCCAAAATAATGGAGAGTTTGAAGTCATCCAGAATTAAACACGCATACATAAACGATTATATCAGGGAAACTGTTTTTGATAATCCGACAGAGATCCAAAGATATATAGATGACAAAACCGTACAAGAAATGCTAGAGGAACAGTCGAAAAAGTTAATACGAGATAATAAAATACAGTTTGCAATGGAGATATTGAAAGATAAACTTCCTGAATTTCTTGAGAGCAAATATGACCTAGAATTACATCAATTAAAAACTGGTTTAAGCAACATCGATTATCATAACCCAGCTAGTTTGGAACCACTGTTTAATGAGATTGTGGGGAATGAGATTAAAAACAGTGATATAAATGTCAGCGAAATCACTAAATTGTATTTAAACCACAATTCTAATTTTATTCAGAGTGCTGTGGCAAGAATTCTTGTAAAACGGTACCAGGACACACTGGCAGAGAAATACCAAACTAGGGAAGAATTGAGAATCAGTACCCTGAGTACAATTTCAGAGGTAATTAGGGAAAAACTTAAACCCTATCTAACAGAAAAGACTATAAATGAAATAAGCATCCTGAATGCAAAGATAAGTAATGGGGAGGTTCCTTCAGACATCATTGTAAAGATATCTTCATATCTGACAGTGGAACAGAAACGGTCTTTAAGCGAAAATGAATTAAAGTCCGAAATACTAAGACAAATTAAAGAACAAAATCAGGTATTAGAGGAATGTAAGAAAGAGGCAGAGCAGTGTTTTGCAGGATCTATAGAGGTTAGAATTAAAGGAAGAGGCATCTCTAAAATATCAAACGTTAAAGTAGATGACGAAATTCTGGTTTATGATGAGAATGGTGGTCTCTTTTATGATAAAGTTTATCTCATTTCTCATGCAAAGAAGGAAGAAACAATATCCTTTATTCGGTTACAAACATCATCTGGCAAAGAGTTGTTTCTTTCCTCGGGTCATCTATTACCTGTTGGTAGTCTTTACAGTAATATCCCCGCCAAAAACGTATTACTTGGTGATGTCGTGTTTACCGTACAAGATGGTGTGATGATGTCAGATATCATAACCTCAATATCATACAAGTTATGTCTAGGAGCGTATTGTCCAATAACAATGAATGGTACTATTGTTGTCAATGATGTATTAGCCTCTTGTTACACAACGTTCTTCCCATCTCGTCTTGCTCACGCTTTGCTTGCCCCCATTAGACTCCTCTTTAGTTATTTACCCCTGTCTGTTTTTTGA

Transcript

Paelopatides20102

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan
PF01079	Hint	Hint module	Family	Interproscan
PF04548	AIG1	AIG1 family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001315	Domain	CARD domain	Interproscan
IPR001767	Domain	Hedgehog protein, Hint domain	Interproscan
IPR003587	Domain	Hint domain N-terminal	Interproscan
IPR006141	PTM	Intein N-terminal splicing region	Interproscan
IPR006703	Domain	AIG1-type guanine nucleotide-binding (G) domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036844	Homologous_superfamily	Hint domain superfamily	Interproscan
IPR050387	Family	Hedgehog Signaling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11889	HEDGEHOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016539	Biological Process	intein-mediated protein splicing	Interproscan
GO:0016540	Biological Process	protein autoprocessing	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-