Gene detail

Detailed information of Paelopatides21842 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides21842	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	ctg4585	41962	121332	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides21842

ATGCCACCACTACTTCAAACAAACTTCAACTCAGTGGCAGGCCAGCGCATGTTGAACCTTCAGGATGCAATTATTCTCAGGTTTTCGGATAACCCCTGGAAGCCACACTCGTTGACGAAACAATCAAAAGAAAGAATTTATGACGAAAAAATCAAGGAATCCTTTCTGGAGCAGTTTCACAGTTTTGACGAGGTTATAGGGAAAATGGCCAACAAATATAAACGGAAAAATAGAATACAACGGGATTTATTTAGAAAAGTGAAAAGTACCCTTAACAAACTCACTCCACAAAATTTCCAGAAGTTGATGAATGAAACCATCCATTTACCCATCAACTCATTGGAGAGACTAGAGGGAGTTATTGACCTTGTATTTGAGAAGGCATGTATGGAACCTCTTTTCAGCCAGGTATATGTCAACATGTGTAGAGTCATGCAAAATATTGAGGTAAAGAAGGCTGATGGCGGCGGTACAGTGCAATTCAGAAGACTAATTTTAATTAAATGTCAGGAACAATTTGAGAAAAAGAGAAACGATGATGAAGTAGAGAAAGAAAAGAAACGAATAGCAACTTTCCCGGAAAATGAGCAGATAGAAGCTCGAGCAGAGATAGATTACAGACAGATGATGTATAAAAAACAGATCATGGGAAATATGAATTTTATCGGAGAACTCTTTAAATTACAACTGCTGACAGAGAAGGTTATGCAGGCATGTATTTTCCTTTTACTAAAGGCTATGGATGAGGAATCATTGGAGTGTATGTGCAAGTTGGTCTCGACAGTTGGAAAAAGTCTTGATCACCCTAAGGGCAAGGCCCTAATGGATCAGTATTTCAACCAAGTAGATAAAATTATCAATGAAAAGAAAGTTTGCTACAGAATACGATTTATGCTGCAAGATCTTCAGGATCTAAGAGAGAGCAACTGGAAGCCACGGCGGAAGGAAGAGAGGCCTATTATGTTGGACCAAATCAGGAAAGAAGTAATGTTAGAAAAACAGAAGAAGGAACAGGAACAACTTGCTCCCCGTGTAGTTTCATGGGGTAATAATTTCAAGCTCGGAGAGAACAAACAAATGTCAATGTTACCACCATCTGAAAGTTGTAATGTGGACAGGTCATCTACCGCCTCCAAGCGGTTTAGAGAGAGGGAGATTAGCCGACCAAGAGAAAGGCAATCGGCTATAGTGGGGTCACATATATCAAGGTCTAACAAGATTAAGAGAAAGCAAAATCAAGACAAGAGAGTAGAACCACCCGCTGATGTTGCATTATCAGAAGAAGAGTATGAGGACAGGTCCAGGGCCATTATAGAGTTATTTGTGAACCTTAAGGACTTCAAGGAAGCTATTACTTGTTTAGATAAACTCAAGTCACCCAATCATCAGCACATCCTTGTACGTGCTGCCATTGAAATTGTTTTAGGGAAATCTTCCTCCCAAAGAGAGTACGTAGGAAGGCTCTTCCAAAGGTTATTGCAATCGTCCACCATCTCAGTTGATCAATTCATCATTGGAAGAGAAACAATGGCTTCAAAACCAAATTCTGGGGAGAAAACATCCGAAGGAGAGGAGAAATCAGCCGTAGAAACGTCATCTGTTGAAATTGATCAACTTAGGAAGGATATCAAGAGTTTCGGGGATGTATTTCATGATATAAAGACCAATTGCAAACTTCCTGAGAACCCAACAGAAAAAACTATGCCAAGTTTGGGAAACAAGGATATTTATATCAAGAAGACTTTTGAATGGTACAAACTCCTGAAACAAGGACACGAAGCTCTGAATGACACGGTAGAGTACTATAATATAGCGGTGTCAAAGAGAGATGAAAAGATTGCTGACCTCGAAAAGAAACTGCTCCAGTCACAGAATAAACTGGTTGAACTTGAAGCTCAAAGTGATCTTATCGTAACAAATATGGAAATGTTACAATCCGGAATCTTGCTGGAAATAAAAACAACAGTGGAAGAAGCTGTGAAAACGTCCATTGAAATGAACTGCCAAAAAAAGACATTTGCAGAACTATTTGCAGACGAAGGGAAAAAGATTGTCGAAGAAGTCTCCTCTGTTTCTACTACAGCCAAAGTTGTGGAAAGTGTTGTTAGGAAAATTGACACCAGTAACTACGAGCGAGAAAAACGAGTAAGTAATGTGATGATAAATAAAGTTCCAGAACACCAGGATGACCAAAAGAACCTGAAAACGGATATGGACTGGGAATTCCTAAAGGAAACTATTGGCATGGAGCCAAAAGATATTGTCACATGTTACAGAGCTGGTACTCCACGGGAACACGATGATGGCGAGCAGATACCCCGACCGCTAATCGTCAAAATGAAATCGAAGGAAATAGCCGACTATTGGACAAATACTGGCGTCGGATATCAAGACATTGCTTGTATCACGGAGACACATCTTACATCAGATATTCTAGATGCTGAATTACAAATTGCTGGCTACAATATCTATCGACAAGACAGGAACTTTATATTAGATCGAACAAGTAAATATGATGCTGATTATAGAGTTAGCGATGGTGGAGGTAGTATAATTTATGTTAGAAGTACACTGCGTGTCACTCGAATAAAATCTTTTGATGGTCCAGATTCCCTTGCTTTAAGGGTATTAACAAACATTGGACCTATCAATGTAGCTTGTATTTATAGATCCATGTCTTTGAATTATGAGCAAAATACTATCTTGGCTAAATCAATCTCAGATCTATGTGGGGATAAGTCACATGAAACAATATTACTGGGAGATTTCAATTTACCTGATGTTTCTTGGATAACTGGAGCTGTTAGGGCTTCTGCAAATACTCGTAATAAGATACTACTAATGCAACAGAAGTATGTGGATTTGGTGCATGAATATGGCCTTTCTTGGTTTATTACCGATGAAGTCACTCGTCGCAGAAGTGTTGATGGCTCTGTGCAAGAGAGCACTATTGACCAAATATTATGTACCAATGAAGCATTAATGAGTAATTTTTATGTACGCTCACCGCTTGGAAAAAGTGATCATGTTTGTATAGAGGCTGTATTAAATATTTCTGATGATTTGACGGAAAATACGAAATTCGAAAAACCAGTTTCAAAAGCTTGGGGAAAAGTATCCATTGACGAGTTATTAAGTAGGTCATATTCTATTGATTGGTCATATAGTAACGTGAAATTGTCAACTGAAGAGATATGGGTTGAACTCCATGGCAAGTTGATGCAATTGATAAATGAAGTTCCAAGTGTGACAAGAGACGGTGTCTCTAATCACGACATGCCATGGAGCAACTCATCTCTTAGGAGGGCAAGAAAATGTAAAGACCTACTGTGGGCTAAATTTGATGCCGATCCTAGCCCAGTAAATCTAAATTTGGCTTTAGATAGTCAAAGCAAGCACGAAAAATCTGAAATCCAAGCTAAAATAAAATATGAAAGAAGAGTCACTGCTAACTTAAAGCAGAATTGTAAACCATTTTATGCATATCTGCGTAGCAAACGTATATTGAATACATGTGTAATGAGTCTAGATAAAGGATATGGTACAACAACGGAAACAGCAATAGAAGCAGCCGAGGTTTTAGCTGATGCTTTTAGTTCAGTTTTGTTGGTGAACTACTCGATAACTTACCAGAGATTATCGAATGTGACCATACGATTGATGAACTAA

Transcript

Paelopatides21842

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02847	MA3	MA3 domain	Repeat	Interproscan
PF02854	MIF4G	MIF4G domain	Repeat	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003890	Domain	MIF4G-like, type 3	Interproscan
IPR003891	Domain	Initiation factor eIF-4 gamma, MA3	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR045208	Family	Initiation factor 4G	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23253	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016281	Cellular Component	eukaryotic translation initiation factor 4F complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-