Gene detail

Detailed information of Paelopatides31248 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides31248	PROTEIN CBG26694	ctg9449	57323	65825	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides31248

ATGCGAATTGTGAGTGATAATGGTCCACAATTTAAGTCTGAAGAATTTCAGACATTCCTTAAATGTAATGATGTGGAACACACATTGACGCCGCCATACCACCCATCAAATAATGGGCTTGTGGAACGTAACATCCAAACTTTCAAGAATGCTTTTGCTAAGGCACATCAAAAGACATTGACTCACAAAGTAGCTAGTGTTCTTTTCACCCTTAGAAACACCCCTCATACCACAACTGGCAAAATGCCCTCAGAATTGTTTCTGAAACGATCCCCAAGAACTAGACTCTCCTTGGTGAAGCCTAGCTTGAAGAGAAAGGTGGAAAGGAGACGGAATGCTGCGAAGCAGATGAGGGATGGAAATAATCCAAGGGTTAGACAGTTCGACCTCTATCAATTTGTGAGAGTGCGAAATATTATTACCCACATCTTGAAATTTCTGGACCCAGTAGAGATACAGGGAGCTTCAGAGGTTTGTCTGTCCTGGTACGAAGCCTCCATGCATCCCCGTCTTGTTAAGGATATCTTCATGGGACGTAAAACAAGATGTAACTTTGCCAAAGTAACATACAGTCAATATAAAGCAGAGAGCGGATCTCTGGATTTGATGATAGAAGGCTATAACAAAGAGAAAGACTTAACATGGGATAATAATAATGCTCAACTGAATTTAGGCCCAGAGGTGAAACAACTCTTACTAAAAATAGATGGATCAATATCTGCATATTTAACTGCCATTATACTTGGTGATATTCTTAGTCATTTTACCTGCCTTGAAACCTTGATATTGAAGGATATGAATATGCATAGAGGCTTTCTTGTGGACTGTAGACTCAGTGCCCATTTGCAATCTTTACGTAGGCTGAAATTATGCTTTGTTGGAAGTACTCTCAACTTTCTTCAAGGGCCAACGATAGACTTACTTCCAAATAAAATTCATCTTTGTCTTGAAAATGAAGTGGTCTTAACCAAAGTGGAAGGAAATAGTCGATATAATTACGGAAAAATGATACCCACTCTGACACTTGAAGATTTAAAAATTGTGTGTGGGAAATACCCAACAATCTTCTTAGAACTAAATATGGTGAATTCTTTACTTACGCAAGAATATACAGAGAAACTATGTAGAATTATTAATAAGCAGATGGAAATACTAAGGCTGGCCAAATGTAACTATATTGATGATAAAACCCTGGAGATTTTATCAAATTCAACTTTGAGATTAAAGACTTTGGTGATTGATGGATGCAAACCAAATGAATGTACATCCTTCGTCACGACCAGTAGCATTGATATGGTTGCTCGTGAGATGAAATCTCTGGAAAGTCTGTCGTTTTATCTTCGAGATAAAGTTCGATTTAATCCTGATACCTTCATCAGTGGTTTTATAGATCTCACATCCTTATCATTAATGTCATATGGAGAGCACCATGAATATTGCACTATAAACCTACATAGCAGAGAGTTTAGTGCTGCTCATCTCTGTAAACTTGATAGCCCCGTCCTATTATCAAGCTTAGCCAAGGGAAGTCCAGATCTTCGCGAGCTTTCACTGGATTTAATATGTGAGATATCTGATAATGAAGTACTTTATATTTGCAAGGTATTTCCTAATCTTTCTCTGCTAAAATTAAATAGTGTCTGTGAAGTAACAGATAAAGCCTTGCTGGGAAACGTGCAGTGCAAGTTATCCAAAAGGGAAGAACAACGGATTAGTCCTCCATCGGTAGATGTTCATACCAGTGAAGAGAATGATCAGGGTGAAGCATGTCAGGAATCAAAAAGAGTAGAACAGTGTTCTCAGTCAGCACAGCCCATAAAAGGAAGCATCTCTGTAGAGACTAACATATCTAACAGCAAAGAAGAATCAAGAAGGGATCTTCCACAAGGAGTGACAAAACCAGACAATCAAGTGCGAACACAGAACCAAACTGAAAGCCCTCGAACCAACATACACGAAAAAGTAAACTGGCCTGTTTATCTTGATATAGCAGATTGTCGTGACCATAATGAGAGAGTATCAAATGGACGAAGAGGCAGCTCTGACAAGTTTAAGACATCTACTACCAGTAACTATGGTAACATGTCCAGAGGGAGATCCATTTTGTACTGTCATTGCCAATGTGGCATAGACTGTGATAGTTATGTAACTGCTCATAGGGGTCTGCGAGAACTTGAGTACCTACAGACTCTGAAACTTGTAGGATGTTGTGAATTAACAGATAAGGGATTCACTCTTGGACTTCAATTCCCTAATCTCTCTCACTTGAAGCTGACTCATTGTGATAACTTGACTGATTCAGGTATTGCAGCAATAGTCACCAATAATCCTACCATCAAAACATTTATCCTTGAATTCTGCAAATTGTTGTCAGATGACAGTGTGAGAATGGTGTTTGAAGGTCTTAAGAATCTAGAAAAACTTAAATTTGATAATTGTTCAAAGCTGACTGCAGCATGTCTCATGTATGTTACTTTATCAAAGACATTACAAGAAGTCTGGTTTGGTAGCTGTAATATTCCTATCACAAACATTGAAAACTTTAAAGAAACTGCAACCACAGTCAAATATCATGATTTTGATTGGTAG

Transcript

Paelopatides31248

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-