Gene detail

Detailed information of Paelopatides32094 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides32094	ATP-CITRATE SYNTHASE	utg100777	118410	179782	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides32094

ATGGGGAAGGAGTACATATGCACAGTGGTGGTGCTACATGTGATTGCAGGTACCAAAATCATTCACATCATTATATCATTTGTAGCGGCTGGTGGTAAAGCCAGATCAAGGAGTGAAGAGACGGGAGCTGAAGGCTTGATCAAGCTAGATGTTGACCTTCATGGTGCCCTGGAGTGGATTCAAGAAGTCATCGAAGAAAACAAAGATTCCTTGTACAAGTATCTACAGCAGTTCATGTTAGAACCATTCTTTGAGCACGAGGAGAGCGAAGAGAGGTACCTCGCAATCTATACAGAGTTGGAACATGACGGATCACATCTTCGAATTCCATTGAACCAAGCCATCAAAGAAGAGGAGATCCATCATGCTTTGCTCCTTGGAGTACCAAAGAGTAAAAAAAGTCAGGTTGCACAATTCATCAAGAAGTTGTTTGCCGTCTATCGTGAACTTCATTTCACTTACTTGGAGATTAACCCACTTGTTGTCCGGGAAAAAATCCATATTTTAGATCTTGCTGCCAAGTTAGACTTCAGTGCCCAGCCACTTTGTCAAGTTAAATGGGGAGATGATGTTGCTTGGATCAAGAAGCTTGGAAGAGACCAGTTGGAGGAGGAAAAACATATCAGTACACTGGATTATGTGTCTCTAGCAAATATAAAATTGACATTGCTGAACAAGAAAGGTCATATTTGGACGGCCATTAGTGGAGGTGGAATTTCATTACTTTTAGGAGATACCATGAAGGACATGGGATGTCTGGATGAACTAGCTTGCTACACACAATTCTCCGGACCAGTCTCGCCTCTGGAAATGTACGAGTTCTTCAAAGCTGTTTTAGAATTGATGTTGCAAGAGAAGTCGGAGAATGGTAGAGTTCTGTTTATTGGCAGCCAAGCCATAGACGTGGTAACATTGACGAAAATTAAGAAGATGCAGGGAGAGGGTATCTATAAGGCTCTGGATGAATACAAAGACCAAATGAAGGCAGCAAACATATCAATTATTATCAGATCAACTGTTGGAGTAGTGAGTTCTAAGAATGAAGCTGTTCCCGATGAACTGCTGGCATTTGGTAAGGGCAAGAATACCTATTTATATTTTGGTGGTGACGTTCCTGTGAGAGAACTGGTACATTTTGCATTGAGGCAAAAAAACATCCCTAGGAATGTACCTCAAATTTGTCGCAAGGTGAGTATTCCATCAAATGCAGAGAAAATATCACTCCCCAAAGCATACGTTCCGGAAGAACTTTTATTTACAAGAGACACAGTGATTGTTGCTGTAGGTATGATCCCACCAGCAATACAGGGAATTCTGGACTATGATTACATCTGTCAGAAGGAGAGGCATATGGTTGCTGCTATTGTAAGGCCTGGCAGTAAACATCAAGAAGAATACTATTCTTGGGGTTCTGGAAGAGTTCCAATTCCAGTATACAGTGATGTGGATCATGCCCTCACCTCCCATCCTAAAGCCAGTGTAGTGGCCAACGCAGCCCCTGGACCGTATGCTTATAAAGTGGCTTGGATGGCTCTTCAAAAACCTCAGCTCCGAGCAATGATCCTAATGGTTGGTGAAATGCCCCTTCAACAGATTAGAGAATTGATCCTTCTAGCCAGACAAAAGAATGTCATGCTTATTGGCCCTACAGTGCCAAAGCATCGTTTGCAGGTGAATGTGTTCAAGCCAGGTGCCTTCCGTTGTAATCTGTTGGGTGACATTGGAGGACCCATGTTAGATGTTATTGACCTTAAACTCTACCGACCAGGAAGTGTTGTTATGCTCTCCAAGTCTGGTGGCCTCTCGACTGAACTCTGTGTTGCAATCGCAAGGAATTCGGATGGATTGTATTTATGTTTGTCTCTGGGAGGAGGAAGGTTCACAGGATCTGGTTTTATGGATCATATCAAATATCTCCATGACAACCCAGCTGTGAGCATGTTCTTACTGATTGGTGAGGTTGGGGGACAAGATGAATACGTCGTATGTGAGGCACTTCAGGACGGACGGATAACAAAACCAGTCATAGCTTATTGTATCGGTGCCAGTGTATCTCACTTCCAAGACCAGCCTGCCTACTTTGGCCACACCGGAGGCGGTATTAGTATGGAGAAGGAGGACGCAGGTGTGAAAAACAAAGCCTTAAGAGATGCCGGAGCTATTGTCCCAATTGCTTTGATGGAATTGCTGATAAATTAG

Transcript

Paelopatides32094

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan
PF16114	Citrate_bind	ATP citrate lyase citrate-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002020	Family	Citrate synthase	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR032263	Domain	ATP-citrate synthase, citrate-binding domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23118	ATP-CITRATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003878	Molecular Function	ATP citrate synthase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006085	Biological Process	acetyl-CoA biosynthetic process	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0046912	Molecular Function	acyltransferase activity, acyl groups converted into alkyl on transfer	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-