Gene detail

Detailed information of Paelopatides34898 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides34898	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	utg119920	163986	293170	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides34898

ATGATCCACAGTTCTTCTCAAACTCCAAGCGTCGTCAGCCCGCCTCCTTCTCATTGCCCCGCTTTTGCCGCGCCAACCCTGGTTCGCGACCCTGCTGCACCTGGTAGTGGCCATTCCGAGAGTCCTCCCGGACAGACCGGACATAGTCTCTCAGGGGAGAGGCCAAATCCTCCACCCCAGGCCACAGGACCTACATCTTACTGCGTGGCGACTGTCCGGCGTGCCTTCCGAGCACACGGACTTTCTGCAGACGTTGCTTCCCTCGCAGCAGAATCTAGGCGATCCTCCACCTTCCGAACTTATGATTCTAGATTGTCTAGATTCTTCCGATGGTGCTCAGAGAATGCTACTACTACCACTGGTGCATCTCTAGAGCAGGTCTCCACCTTTCTAAAAATGCTGTTCGACGAGGGCAAGCAAGTCAGCACCATTAAGAACTATCGGTCGGCCATCGGCGCAGTCCATTTAGGCTTCGCCGACGGTTCTACGCCAGGTACGAACCGCGTCCTAGCGCACCTGGTAAGGGCTATGGCACTCCGCAGACCAATCACAAGAGTACAACTACAAGCTGCTCTAATCGAATCCAACCAGTTAGACTATGAGGAGATTTATAACCAAGCTTTGTTCCACTTGGATATGGAAGATGTGGACAATGTTACCACCAAACCTAGCAACCTGAAGGAGGAAATCCTAGTTGTCAACAGGGCACCATCAAGAACTATCGCTCGGCCATTGGAGGGATCCATATGGGTTTTCCCCGATGGCACCACCCTAGGCAACAATGAGGCCCTGGCGCACCTGGTAAGAGCCATGTCCCTACAAGGACCAGTCACAAGGCTCCTCGTCCTCTCCTGGTCTATCAACGCGGTTCTCGAGGCGCTCGCACGACCGCCCTTCAAACCGCCAGTGCAGGCTTCCCTACCAGATCTCACTCGCAAAGCTCTCCTTCTCGTAGCGGCGGCCTCCGCCAGACGGAGAGGTTGTCTCCAGGCTCTCTCGGTAAAACCGGGTCATATCAGATTCGAGCCTCACAAGGTTGGACTGGTTCCAGACCCAGAGTTCTTACCCCTAAACCAGACCTGCATTCCTTGGAGTGGTGATAACTCTGCAATGAGATTCACGTCCAATGACTCGTTTGTGAACATCAGCGGTACTAGTTATCTCACAGAAGGCTGGTCTGCTTCTCTCTGGGTCAAGAGGTTTAACAAAACGACACATAATTGTGGTATATGCACAGTGATGGTCAACAATGACTCATTTCACCTTCATAAGCTAGCTAGTGCCAATCATACGAGTCCAGACGTGTATCAACTGAACTTTAGCAATGGTATTAGATTCTTGAAGTTTCAAGTACAATATGACTGGGACTGGAACATGATCTCCATCACTATCAATACAACACACATATGTTTATATGAAAATGGCGTGAACCTGCGAGATTCCTCAGAACTACCAACAGCGCAAGAAAATTGTAAGAACTTTATTGCAGATATTGATGAGTTATTTAACAGTTCTCTGTCCATGGCTCTCAACTCTCCTCAAGATGAGGGATGTACAGGTCTTGAAGTGGATGAAGTTGCCATGTGGTCCAGAGCTTTAAATATGTCAGAACTCATGGCTCTCCGTGTTCGGCCCTTCAATACTAGCTGTGAGCTTAATCTTGATCCAGATGCGTGCGACTCTTCCCCTTGTAAAAACAATGGGACTTGTGAAAGGAATGTCGCCCACTACGATTGTCTGTGCACAAATGAAATGGGTGGTGACAACTGTGAAATTAATCTAACTGCTGAATACAAAAAGTTTGAAAATGCCCAACCGGAGGAGGCTTCTCATCAGTTGGATAACATAACCAAACAACTTACCAACGGCGACAAACCTCGCTCAATCGACGAAGTACTCTTCATGACAAATATTTTGGATGCTACTGCATCGAAGGGATTGCTAAATGATAACACTTTATCTAAGGAAGTTCAGATGACGAACAGAGTGTCATATGTGTCAATCGCCAGCACAATATTTGATTCAGCTGAACAGAGTGCCGATGTAGCCGAAGAAACCAACATTAATGAATTGATGAGTGAAATTGAGAAAATCCTCAGTGAAGTCTACTTTTATAGTAACATCACAAATGAAACAATTTCCACAGGCCTGATAGATATGATGTACATTAAATTCAGCCCAGGACAAAAACATTCAGATAAGGTCTATGACATTCCTAATACGAAAATTACAATTCAGATACCAAAGGAAAACTTCAAAGGAGATCATCAAATGGTTGTCATGGTGTATCCGAAAGACATGAACGCTCTTCTTATAAAGGACGACCCCAAGAAAGAACCGATTGCGACAGTTATGGTGAGCCTTCAACTACCTGACACTGACACTGACGAGACACTAAAGTCACCTATTATACTCTCCTTTAGTGTGGAAGCTGAAACGATGAACAAGGCAGCAGAGGAGAAGACAGTAACCTGCAAATTCCTGGATTTGGATAAGTCAAAGTGGGAAGTTAAAGGTGTTGAAACTACAAAAGACTCACAGAATGCGACTAACGTTGATTGTAAGGTGTCCCATTTGACCAACTTTGCTGTCCTATTGTCTTCAGCGACACTGGTCTACGTAATAAATTATTTGATATTTTGTGAACTTTTAGCTTTATTTTTTTATCATTGCTGA

Transcript

Paelopatides34898

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF02899	Phage_int_SAM_1	Phage integrase, N-terminal SAM-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR004107	Domain	Integrase, SAM-like, N-terminal	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35617	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-