Gene detail

Detailed information of Paelopatides35174 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides35174	SODIUM/CHLORIDE DEPENDENT TRANSPORTER	utg121830	79008	126691	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides35174

ATGTTATCATCACACACATACACCATCTACTACCTGATTGCATCACTCACGACTGAACTGCCCTGGGTGGGCTGTGATAATTTCTGGAACACAGTCAACTGCAGTGCCAGGTATCAGGAATGCCTGGGATTGGAGACTCGTGAAGAACTAGCCAACCTTGGAGTTGTTAATGCACTAATGGGATCATCATCCAGTGAAGAATTTTTCAAGTTGCGGATGCTGCAAGAAGCGGACAATATTGGCGAGACTGGCCCGGTCAGCTGGCAGTTAGCCCTTTGTTTGTTAGCTGCATGGGTCATTGTGTTCCTTTGCCTCATCAAGGGGGTCAAATCATCCGGCAAGGTGGTGTATGTGACTGCTACATTTCCTTATCTCGTCCTTTTTGCTCTCCTCATCTTGGGCTTGACTTTGGAGGGTCACCAGGAAGGCATCAAGTTCTTCATTACTCCAAAATGGGAACTTCTCAAAAATCCTAAGGTATGGCTTGCTGCAGCAGTTCAGATCTTCTTCTCTTTGAGTGCTGCATGGGGTGGACTAATTACCTTATCTTCCTATAACAAGTTTCATAATAACTGTTACATGGACTCTCTCTTTGTTGCAATTGCAAACTGTGCCACCAGTATCTTCGCAGGTTTTGTCATTTTCTCGATCGTTGGTTTTATGGCCAATCAGCTGGGCAAAGAGGTAGATGAGGTGGTTGACCAGGATTTGAATATCCGATGCAAAGAATGTCAGGAACTCCGTGATTGGCTGTTGTCTCTTCTGATATCGGTTTCTCTACCTTGTCTGGTTTCTGTTTTTGATAGGTTTTGGACTGGCATTCATAGCCTACCCGGAAGCATTGGCCCTTCTCCCAGCGGCTCCAATCTGGTCCTGCCTATTTTCCTTATGTTGCTGACCTTAGGCCTGGACAGTCAGTTTACTATCATCGAGACCATCGTGACTGCTATTGTCGATGCCTTCCCTGACAAACTTCGCAAGAGGAAGTTGTACGTCTTGATGGGCCTGTGTTGTATCAGCTATCTGCTGGGACTTATCTGTGTGACAAGAGCTGGTATCTTCTGGGTGAACCTGATGGACAGCTACGGAGCTAGTTTTGCTCTTCTGATATTTGCCATCTGCGAGTGTGCTTCCCTCTCCTGGATCTATGGAAGTAGGCGCTTCAAGAATGACATCCGTACCATGATTGGCGATGGGTGGGTCGACTTCCCATTGTTCTATTGGTGGCCTATAAATTGGTGTGTTATCACCCCTGCCCTGCTTTCTTTTGTCCTAGTGTTTAACTGGTTGGCTTGGACTCCACCAACTTACAATGGCGACTACCCCGAGTGGGCCCATATGGTCGGATGGATGATGATCTTTCTATCTTTGGTCTGGATTCCTGGCATATGGGTGTATGAATTCATGAATGGAGAGGGCGATATTGCCAGTTTCCAGTACATTTACATCTACGATGCTCTCTTGGAGGCAATTATGTATGTTGATTCTCGAATCTCAGTTAAAGAACTGACAGAAATGCGCTTTTCATCAATCGAGACCAAATCTAGGGAGGAATTCCAGATTTTAGAAGATTCTCCTTCTGAACATCAAACTGAAACTGATCTTGTTGGGAAATTATCAGAAAACATTAATAAGAACAGGTTTTCTCACCATATTCCAGGTGCAACTACTGGCAGTACTGATTATATCTGTGCTACTATTGTAAAGGGCAATGGAGAGAGGAACTTCATACTGACACAGTCACCATTAGCCTGCACTGTAGAAGATTTTTGGAGATTGGTCCATGATTACAAATGTTCATCTATTGTGATGCTGAATGATACAGAGGCATATTCAGACAAGATTTCAGTACAGTATTGGCCCGGTGGAGTCAATTCAAGTTCACAGTATGGATTTATGAAGGTATCCTGTCTAGAGGAATATGAAAGCCAGTTGCTCACCAAGAGGCGACTTCAAGTTACTCATCTCAGAGGCAATACAATCACTGTGGATCATTTTGCTTTCCATGGATGCCAAAGACAGAAAGCAGGTGTTCCGGTGTTAAGCGAATTCATCAAAAATACTGCAAATGAACGTGCTGGGTGTACTCTTATTCACTGTATCAATGGTGTTGGTCTTAGTGCTGTGTACTTTATCGTCAAGACTGAAATGGAAAGAGCTGAATGTGATGGCGTAGTTGATATCTACCAAGCTGTGAGGCGACTAAGAAAGACAAGTTTACATGCCATCCAGACACAGGAAGACTACGTATTGTGCTATAATCTCCTGAGGGATCATTTAAACAATGAAAATGTTTATGATGATATTTTCTAA

Transcript

Paelopatides35174

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF00209	SNF	Sodium:neurotransmitter symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000175	Family	Sodium:neurotransmitter symporter	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR037272	Homologous_superfamily	Sodium:neurotransmitter symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11616	SODIUM/CHLORIDE DEPENDENT TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0035725	Biological Process	sodium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-