Detailed information of RPACG13460.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG13460.1GLUTATHIONE SYNTHETASEtig00004227369507370079+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan
PF03199GSH_synthaseEukaryotic glutathione synthaseDomainInterproscan
PF03917GSH_synth_ATPEukaryotic glutathione synthase, ATP binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR004887DomainGlutathione synthase, substrate-binding domainInterproscan
IPR005615FamilyGlutathione synthaseInterproscan
IPR014042Homologous_superfamilyGlutathione synthase, alpha-helicalInterproscan
IPR014049Homologous_superfamilyGlutathione synthase, N-terminal, eukaryoticInterproscan
IPR014709Homologous_superfamilyGlutathione synthase, C-terminal, eukaryoticInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR018314Conserved_siteBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR023270FamilytRNA (C5-cytosine) methyltransferase, NCL1Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR037013Homologous_superfamilyGlutathione synthase, substrate-binding domain superfamilyInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11130GLUTATHIONE SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004363Molecular Functionglutathione synthase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006750Biological Processglutathione biosynthetic processInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0016428Molecular FunctiontRNA (cytidine-5-)-methyltransferase activityInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0043295Molecular Functionglutathione bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG13460.1 global RNA-seq network
TOP