Detailed information of SKAU_T00028910 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00028910ELONGATOR COMPLEX PROTEIN 1CM056376.1104155932104180098-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00226DnaJDnaJ domainDomainInterproscan
PF00684DnaJ_CXXCXGXGDnaJ central domainDomainInterproscan
PF01556DnaJ_CDnaJ C terminal domainDomainInterproscan
PF04762IKI3IKI3 familyRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001305DomainHeat shock protein DnaJ, cysteine-rich domainInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR002939DomainChaperone DnaJ, C-terminalInterproscan
IPR006849FamilyElongator complex protein 1Interproscan
IPR008971Homologous_superfamilyHSP40/DnaJ peptide-bindingInterproscan
IPR012724FamilyChaperone DnaJInterproscan
IPR018253Conserved_siteDnaJ domain, conserved siteInterproscan
IPR036410Homologous_superfamilyHeat shock protein DnaJ, cysteine-rich domain superfamilyInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12747ELONGATOR COMPLEX PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0002926Biological ProcesstRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0009408Biological Processresponse to heatInterproscan
GO:0031072Molecular Functionheat shock protein bindingInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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