Gene detail

Detailed information of SKAU_T00033870 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00033870	HISTONE-LYSINE N-METHYLTRANSFERASE SETD7	CM056376.1	122394086	122405441	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00033870

GTGCAGTTGTCGCTTCTTTCTGTCGGTCATGATGTAGCACTGGCTCAGATGGTGATGTCAGCTTTTCTAGGGAAGGGGGGCAGACATTTCAGCAAAGTACTGGAATAATATACACGGGACGGGAGGAGGTGATAAACCAGTACACCTGATCGAACTGCACTCTCAGACTCTGCTGTAGCTACAGGAAGAGCCTCCAACCATGGATAGCGATGACGAAAATATGGAAGAAATCGTTGAAGGCCCTCTTGACGAGGACGGCCAGCCGCACGGTTTCTGCACCGTCACGTACTCGTCCAGCGACCGCTTCGAGGGGATGTTCGTCCACGGGGAGAAGAACGGTCGAGGGAAGTTCTTCTTTTTCGACGGGAGCACGCTGGAGGGGTTCTACGTGGACGACTCCCTGCAGGGCCAAGGCGTCTACTCCTACGAGGATGAAGGCGCGCTGCACGGGACCTACGTGGATGGGGAGCTGAACGGCCCCGCCCAGGAGCATGACGCCGACGGGCGCCTCGTCTTCAAGGGCCAGTACAAGGACAACAACCGCTGTGGCGTCTGCTGGATCTACTACCCCGACAGGGGCGGCGTAGTGGGCGAGGTCAACGAGGACGGCGAGATGACGGGCGGCAACGTGGCGTACATGTACCCCGACGGCAAGACAGCCCTGTACGGCAGCTTTGTGGACGGAGAGCTGATCGAGGCCAGGCTTGCTACGTTGTCCTCGGTGGAGAACGGCCATCCCCACTTCGACATTGTGCCTGACGGCCCAGTCTACAGTTATGACAAGTCCACCTCCTCCTGCATTGCTGCCCATGGCTTGCTGCCCGATCCCTATGAGACTGAAAGGGTGTATGTGGCAGACTCTGTAATCTCAGGGGCAGGGGAGGGCCTCTTCTCTAAGACCGACGCAGAGCCCAACACCGTGATGGCCTTCTACAACGGGGTCCGCATCACACATTCGGAGGTGGACAGCAGGGACTGGTCACTCAACGGGAACACGATATCTCTCGACGAGGACACGGTGATTGACGTGCCTGAACCATTCAAGAGCACAGATAAATACTGCGCTTCACTGGGGCACAAGGCCAACCACTCGTTCACTCCTAACTGCACGTACGAACCGTTCCTCCACCCTCGTTTTGGACCCATCAAGTGCATACGCACGGCTAGGGTGGTACAACGGGACGAGGAGTTGACTGTGGCATACGGCTACGACCACACACCTTCAGGGAAGAGCGGGCCTGAGGCGCCCAACTGGTACAAGCAGGAGCTGCAGACCTTCCAGGGCCCTCCGACGCACCCTTCGGAGTGAGACCCATGCCCATCCCTTCGGAGTGAGACTCACACCCTCATCCCCTCAAACCATCAACCTTTCAACCCCTCAGCCCCTCAAACTCCCAACCCTGAAGCCCCTCTAACCCACAACCTCTCCACCCCTGAAGCCCTGAACCTCTCAACCCCAGAACCCCTCTACCTCTCAACTCCTGAAGCCCTCAACCTCTCAACCTCTCAACTCCTGAAGCCCTGAACCTCTTAATCCCACAGCCTCTCAACTTCTCAACCCCTCAACCTATCAACCCCTCAAACCCACAATCTCTCACCCCCTCACCACAAGCACGGTTGCACCAGGGACTAACAAGACAGGCACCGCTAtccaacacacacgcactcaaacaCCGTGGAACTATGCACTACTGACCAACCAGGGAGTCTATACACCTCTCGCACTTGCCACTCTTCTTCTAGCATTTTGCAATGTGCAAGCCAGGGGGTTCTTTTCTTTGGTTTACTAGACACACTTCAGTTCTGCACcgcttttttttcctcttttcaaAACGAATACCCTCGCAGTGATGCTAGCGATCACTGTCCAACTTCAGGTCCCATTAAACCGTTTCTGAACATTATTTCCTCAGCCTGAGCGTTAGAAGTACCTCAGACCTCCTAACTGGCGAAGTGCAGCACTGTTTGCATTAAACGATGGTTGTGCACACTCCACAGCATTCTTCACTAGTGCAGTTGCTCTCGCTCTTCTTCTTTGCGCGTCTCTTCTATTTTCTGTAACGGGTAGGGACGGTATATCCAATCGCGTGGGCTCAGGAAGTGTCAACCAATTggtgtttttgtcaaaaaatatataggcttATTTATTGAGGAAAGTGATTGAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00856	SET	SET domain	Family	Interproscan
PF02493	MORN	MORN repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001214	Domain	SET domain	Interproscan
IPR003409	Repeat	MORN repeat	Interproscan
IPR017155	Family	Histone-lysine N-methyltransferase SETD7	Interproscan
IPR044436	Domain	SETD7, SET domain	Interproscan
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46820	HISTONE-LYSINE N-METHYLTRANSFERASE SETD7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016279	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0018024	Molecular Function	obsolete histone lysine N-methyltransferase activity	Interproscan
GO:0018026	Biological Process	peptidyl-lysine monomethylation	Interproscan
GO:0070828	Biological Process	heterochromatin organization	Interproscan
GO:0140945	Molecular Function	histone H3K4 monomethyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-