| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g12095 | PARTNER AND LOCALIZER OF BRCA2 | HiC_scaffold_4 | 52069780 | 52097747 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16756 | PALB2_WD40 | Partner and localizer of BRCA2 WD40 domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011047 | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR031920 | Domain | Partner and localiser of BRCA2, WD40 domain | Interproscan |
| IPR042417 | Family | Partner and localizer of BRCA2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14662 | PARTNER AND LOCALIZER OF BRCA2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005654 | Cellular Component | nucleoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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