| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g16996 | RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN | HiC_scaffold_7 | 20300526 | 20333093 | + |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF00883 | Peptidase_M17 | Cytosol aminopeptidase family, catalytic domain | Domain | Interproscan |
| PF08145 | BOP1NT | BOP1NT (NUC169) domain | Domain | Interproscan |
| PF18295 | Pdase_M17_N2 | M17 aminopeptidase N-terminal domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000819 | Domain | Peptidase M17, leucyl aminopeptidase, C-terminal | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR011356 | Family | Peptidase M17, leucine aminopeptidase/peptidase B | Interproscan |
| IPR012953 | Domain | BOP1, N-terminal domain | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR028598 | Family | WD repeat BOP1/Erb1 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR041417 | Domain | Probable aminopeptidase NPEPL1, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17605 | RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000463 | Biological Process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0019538 | Biological Process | protein metabolic process | Interproscan |
| GO:0030145 | Molecular Function | manganese ion binding | Interproscan |
| GO:0030687 | Cellular Component | preribosome, large subunit precursor | Interproscan |
| GO:0042254 | Biological Process | ribosome biogenesis | Interproscan |
| GO:0043021 | Molecular Function | ribonucleoprotein complex binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0070006 | Molecular Function | metalloaminopeptidase activity | Interproscan |
| GO:0070545 | Cellular Component | PeBoW complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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