Detailed information of SQW42HX01_g25597 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g25597WD40 REPEAT PROTEIN 4HiC_scaffold_1334610533471639+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR028884FamilytRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16288WD40 REPEAT PROTEIN 4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0036265Biological ProcessRNA (guanine-N7)-methylationInterproscan
GO:0043527Cellular ComponenttRNA methyltransferase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP