Detailed information of SQW42HX01_g28691 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g28691ELONGATOR COMPLEX PROTEIN 2HiC_scaffold_151098670311011662+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF14835zf-RING_6zf-RING of BARD1-type proteinDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR037289FamilyElongator complex protein 2Interproscan
IPR039503DomainBARD1, Zinc finger, RING-typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44111ELONGATOR COMPLEX PROTEIN 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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