Gene detail

Detailed information of WZF205000 in Chaetoderma shenloong Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
WZF205000	30S 40S RIBOSOMAL PROTEIN	chr4	28675947	28724564	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

WZF205000.2

TTTTACTCACAATGGGGTGAAAATGTTATTCTGTCTTTCAACAATCTAGCATTTTGTATTAATAGATTCTGTATGACCTTTGTTGTTTTGTGGTACATGTATGCTAAGCCTTGTTTTGTCATTGATTCAGATTTTTAGGGTGCAAAGATTTTTTATGTCAATATCACCACGGATGTTAATTTTTATCTCATTTCCATAATTCTTACTGCCTGTGTTTATTAGTGTGATTCTCCTATTTTTATTTACTTTAGTTTTGATGAGGCGACCATGGTTTTGTTATTTGGATGCTATTTCCGTGAAAAGCTCTTATGAATGTCAAATGAAAAGGATTTGAATTTATTTACTTATTTAACTCATTTCTCAACCTTTTCTTAACACCAACTGCTGAAATTTGGAATGCGATTTTTATTACATACATTTGTTGTTTTGACTGTCTTACTGCTGCCAGCTATCAGACAAGAATTTCAATTTCAATTGCCCTGCTGAATATTTTGAAAACTATTCGACTGAAAGTTGTTGGTGGCCAGCCGTCAGACAATAATTTCAATGGGCAGAAACTCTTGGCCTGCTAAATATTTTGAAAACTTCAACTGAAAGTTGTTGGTGGACAGCCATCAGACAATAATTTCAATGGGCAATAACTTACTTGGCCTTGGGCAATAACTCTTGGCCTGCTGAATATTTTGAAAATTAATTAATTAAGCATATTCAGAATTAAAACCACATTGAAAATGTAGTCTGCAGAAACTCAACAGGCGGGTAGTTAAAAGGTCTGCTAATAAATTAGATTGGCTCAACATCTAGAAATGCCATGCGAATCCTCTCAAGGATGTACATGTAACTTCAAATCCACATTTATGCTGAAGCAAATAGTTTTATATTTGCAGATATAATAAACTGGCGATGAAGATTAGAAAATTAGCGCACATGATTTCCAGGCTTGAAGTGAAAGATCCATTCAGAGCAGAATCCACAGACCAGCTTCTGGATAAGTTGTACTGTCTGGGTATTGCTCCAACAAAACAGAGTCTGAGTCTGGCAGATAAAATATGTGCATCATCATTCTGCAGGCGACGTCTACCCGTGATAATGGTCGGTAATCACATGGCACAGAATATAAAAGCGGCGGTGACATTCATTGAACAAGGCCATGTCAGAGTTGGACCTGAACTAATAATGGACCCAGCATTCCTTGTCACCAGAAATATGGAGGACTTTGTGACATGGACAGATACGTCGGCCATTAGAAAACATGTACTGGATTACAATGAGTTGCGTGACGACTTTGACATGATGTCATAGCGGAAACCTGGAGTGCAGGAAAAAACAGAATATCCATTGTACATATATCATTGTGTCATCATTAAACCATCAGCTTCATCTTATGAACCACAATCTAACTCTGTTTTATCTCTCTGCCCAAGATGTACACGGATAACAGTATACCAGATTCTGATGCGTTAGTCCATCCAGCTTTATAAAAAGAAAACGTGAGCAATTAGATATTTCAAACCCTCGCATTCCCGATTTTATCACATGGTAAATTTTTTCAGGTTTTCCACGATCGAAAATCACGATTGTTTTGTAAATCATGAATTTATATAAGTAAAAATTAAATAATTGTGAATTATTCTTACTGCATAAAATATTTTAAAACCTTTTAATTATCCTTTAATACGATCAGTCACAGGAAGTGACATGTTGCTCAGCATATGTATGACCATTTGCATGCATACCAGTGACACATTCTCAAAGTCTTCTCTCGGCCTACAAATGGACATTTCTAACCACCATTAGTGCACTTTCGTCATTGATATTCATTTATGGTTATATCTGGCCAATGTGAACCCAGGTTGATTAATCCAGTAATTACAAGTATTCTTAAATAATTGATCGTGATCACTCAAAGCAATAATCGCACAAGCGTATCATGACTAGTACTTCTTATGCCATCTTAGTGTAGAGTCCCACATTTTCTTGCATTAACATCCCAGTCAAATCAATACAGCCTAAGGGCATCCAGCCACTCAAGCGTGGTCGAAATCCCTTCACTAGAACTTCAGCTTTACTGCCAGTCCGACATTTTAATATTTTCGCTAACCTTGAACATGATCATTGAACATTTGACCCCAACATTCTGTTTTAAAAGGCATATATGCTTTGCTATGACTGCTCACCCCGATAATCATGAAACGGAAAAGCTCTCCAATAGAACGTCTACTGGCCTTGCCTTGGGATGACCTGTGTTTATAAAGATGACTCCCCTGGGTTTGATTAATAATGTTTATTAAATTAAAATATCGAGACATAATAGCTACAAATGATTACATAGATTACATACACAAGTTTTAGATTATTTCTAAATGTGCTTCCACCTGAGAATAATAGAGCAATCTGGTGTATCGATCAAGCATATGGCACCATAATCAACAGTCACGTGTAGGCTGACATCCTAATCAACTACGTCTTGAATGACGCAATTTAGTGTATCATAAATGCTTAATAGTCCGTCAAATTGTATGTCTACTATTTAATAAACATTCTTCTGAAAATTATCTGTATAGTTTGCTGGAAATTGAGATTCAGAGACTGCAGGTGTTGATCAATCTCAACACGGGTTGGAGCTTAGCTACAGATGGATGGGGCATAGATAAAACTGGATCCCTCCACTGGATATCTATAAAGCAGGATGAAAGATGATAGCGACGTAGTCAGTGATAAGTAAACCAATATGGGTTTTTAAGCCTGACGCTTGGATACGATTGTGAATCCAGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01479	S4	S4 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002942	Domain	RNA-binding S4 domain	Interproscan
IPR022801	Family	Small ribosomal subunit protein uS4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11831	30S 40S RIBOSOMAL PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan
GO:0030515	Molecular Function	snoRNA binding	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan
GO:0034457	Cellular Component	Mpp10 complex	Interproscan
GO:0042274	Biological Process	ribosomal small subunit biogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-