Detailed information of alvinactis_v1_g10260 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g10260TNF RECEPTOR ASSOCIATED FACTORchr_545736344585481-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF12539Csm1Chromosome segregation protein Csm1/Pcs1FamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR020981DomainMonopolin complex subunit Csm1/Pcs1, C-terminalInterproscan
IPR038608Homologous_superfamilyCsm1/Pcs1, C-terminal domain superfamilyInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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