Detailed information of alvinactis_v1_g10260 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:4573634...4585481
NR annotation: XP_020906109.1, TNF receptor-associated factor 4 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60803TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN=Traf3 PE=1 SV=2
Q13114TNF receptor-associated factor 3 OS=Homo sapiens OX=9606 GN=TRAF3 PE=1 SV=2
P70191TNF receptor-associated factor 5 OS=Mus musculus OX=10090 GN=Traf5 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF12539Csm1Chromosome segregation protein Csm1/Pcs1FamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002083DomainMATH/TRAF domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR020981DomainMonopolin complex subunit Csm1/Pcs1, C-terminalInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR038608Homologous_superfamilyCsm1/Pcs1, C-terminal domain superfamilyInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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