Detailed information of alvinactis_v1_g11942 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:30704259...30723145
NR annotation: XP_020902387.1, transcription initiation factor TFIID subunit 6 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49848Transcription initiation factor TFIID subunit 6 OS=Homo sapiens OX=9606 GN=TAF6 PE=1 SV=1
Q91857Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis OX=8355 GN=taf6 PE=2 SV=3
Q62311Transcription initiation factor TFIID subunit 6 OS=Mus musculus OX=10090 GN=Taf6 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02969TAFTATA box binding protein associated factor (TAF)DomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF07571TAF6_CTAF6 C-terminal HEAT repeat domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011442DomainTAF6, C-terminal HEAT repeat domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR046344Homologous_superfamilyTAF6, C-terminal HEAT repeat domain superfamilyInterproscan
IPR037796FamilyTranscription initiation factor TFIID subunit 6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10221TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0046695Cellular ComponentSLIK (SAGA-like) complexInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03131TAF6; transcription initiation factor TFIID subunit 6-Chromosome and associated proteinsko03036deepkoala

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