Detailed information of alvinactis_v1_g12270 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_6:4270683...4286504
NR annotation: KXJ16652.1, Protein SOX-15 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28EW4Transcription factor Sox-13 OS=Xenopus tropicalis OX=8364 GN=sox13 PE=2 SV=1
P40649Transcription factor Sox-13 OS=Xenopus laevis OX=8355 GN=sox13 PE=2 SV=3
Q9UN79Transcription factor SOX-13 OS=Homo sapiens OX=9606 GN=SOX13 PE=1 SV=3
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF07496zf-CWCW-type Zinc FingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR011124DomainZinc finger, CW-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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