Gene detail

Detailed information of alvinactis_v1_g12480 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_6:7237692...7244124
NR annotation: XP_020905916.1, early endosome antigen 1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g12480

ATGGATAATTGTGATTGTATGGAGAACAGTCACAGATGTTGCTGTGGAGAAGGACACAGCCATATAGAATTAACTGGTGATGGTGGCAGCTGTTGTGGACATTTAGATTCTTCGAGCCACCATCAGCATGATTGTTGTCACTCTGGTGGCCATCATGAACACCAAGATTTCAACAAAGATTATCACGAGCACCGCTATCACCAACTCCTCCAGGACAGGGAAGAAATGGAGAGGAATTATGAAAGGGAAAGGCGAGAAAGGAAGGCCACAGAGGAAAAGTTTCAAAGAGAAAACAGGGAAAGAGCCATGTATGAGGAGAAACTTGTGGACTTGAACTGTAAGCTTGGAAGATATGATGATGATTTGAACCTGCTCAGAAATGAAAACGGATTTTTGAAGAATCAGTTTGATAGCCTACGAAATGTGATTAACTCAAGAGTGAGCTTCGAGAGTAGTTCCTTTTCAGCACCAGATGTAACATCTTTTCAGTCGGATTCTGATTCTGTAAATACAGAGTCATATAAGCATGAAATTTCAGTTCTGGCCAACGAAAATGAACTGTTCAAGCAAATCATCGACATTATCAATAACCAGGCCCCAGAGGAGAACTTTTCAGAAAAGTACACATTTGAGGGCAACTGGCGCACAGATCCAGAAGTAACTCGTCTGCAAGACGACAATTCTAAATTAAAAAGTCAAGTTCGAGAGGTACAGAGAAATCATCGTGAACTGGAATCCCAGCTGGAGCAGGTTAACCTTGACCTTGACAACAAGACCCGCAAGATGAAGAAAGATATATCACATCTGGAAGAGGAACTCCATTCTAAGAGCGTATATTGCGAAGACCTGGAGAGGCAGCTTTTCCAAGTAAGTTCAGAATATCAAGAAGAAATGCAGAAAATGGAAATAAAGATCGAGAGTGAAGTTTTGAAGAAAACGCAGATGCAGGAAGAAATCAACGTGTTTGAGAACACCGTCCACAGACTTGAACTAGAACGAATAGACATGGTAGCTAAACTGGATGAATTATACAATTCAGAAAACGAAATCATTTTAGCGCGGAATGAACTCGAAGGTCGATTTTCTACTGAGATGAACGAGCTCCAAATCCGCCTCGAGGACGAAATTCGGTCCAAGATTGAACTGTCACAGGAAATGACCCTGTTGATGAACGAATTTGTTGATTTGAGAAATAAGTCCAACCAAATGGAGGAAGTGTATGCCAGTGAGATTGCAGGTTTGCGATTGAACCTTGGTGCTGTGATGGGAGACGGTGCAATTATCCAAGGTGGTGGAAACAGCATGGCCACCAGCAACACGTTATCATCGATGCAACATCAAAATAATAACAATGCAATGGTCACCGGTCAAAGACTTCCAGAAAGCAGCGGAGTAAGGCAGGCTGGGAACGACATTCAAAACCAGTTAAATAATGAAATCCAGAAACGCGAGGCCCTCGAGAGAGAAAACAAAGATCTTTTATACAAGATGAAAAATATTTTATCAAATGCTGATCCAGACGCCAATGACAATGTTGAGCAACAATCGAAACAGTACAGCCAATACACTAGCGTTTCTTCTAATGACACAGTTTCAAAGAGCGATAATAGTTCCGATGTGACAAGAAAGATTCGAACTCTAGAAAACAAAGTTGCCGAGTTATCTGACGAATGTGAAAGCCTGCGTCGCAGTGCCAAAAAGCGGAAAGAAACTGAAAACAAAAATCATGAGTTGATGGACGAATTGGAGGAATTGTCTTCAGAACGGGATGGGATGTTGAGAAAGCACAAGACCCTTGTAAATGAAGTCGATAAATCTTCGTCTTCGTTACAAGATTTAGCTGACAGGAATCGGAAACTGATAAACGAAATCGATACATCGTCGCGACGGATTCGGGATATGGAAGACAGTTTCAGGCAGGAAAGGAATAACTTGATCCGTAGTTATGATCGAGAGAAATCATTAGATATGAGCGATTTTAAAAGAAAGATGGAAGGCCTTGAAGAACAACTGAAAGTTCAGAGAAGAGAAAATAAAATGCTCGAAGACAAGATACGAGGTCTTGAAGATGAAATAGACCAACTCAAAGCTGGACAGACTGACCATCGATCATCACAGATCGTAGATAGGGGTACTAACAGAAGATCTGTAGAAGACTCGTACAGTGGAAGCTCAAATTATTCAAAACCAAACACATCGTATAGCTCAACAACAATATTAACAGCAGCAGGGACGCCAGACAACGCCAAAGATTTAAAACGGAAAACGACGGAGCTAGAGAAAGCTCTAGAAGGAAGAGAGAATGATCATCTTAGCAACTTGGAAGAACAAAGGAGACAACTTCGCGATGAATTTGACAAAGAAAAACAAGCTCTACGTCAATGTTTTGAGGAAGAGAAGCGCAACCTCTTTAACAGTGTTAGTGGAAACGTGGGACCACAGAGTGGACAGGTGACAAATGTTATGAACACTGCCCCTCATCAGTTCAGTCAGGGTACTTCTAATGTACCAGGCAATATCATTCCACAAAGTGGACAGTTTGGACAGACCGTTCCTCAAATGTCCTCTCAACAACCTCTAACCTCACATCAAATAACACATCCCCAAAATAGCTTCCAAAGTGGAACAACCCAGCAACCTTACACTTCTCCACAAAGTGTTGCTGGACCACAGGCTCAATATACTAATTACACTACAGGTCAGAGCAGTGGTATCCCTGTGGTGCAGCAGGGTGTTGACCAGATGACTTCTTTCCAAGGACCTCAACAACCAGCGCAGTTTACACAGCAGTCTCATTTTCCTCAGCAGCAGGGTGTGGTCCCACAAAACAACCAAAGCCCTATTTATCCAACTGCATTACCTGGAGGTAATAAGGAAATTTCGCAGCTAAATGAAACAATAAACAAGCTCCAACAGGAAGTGGATCGTCTAAATATGGATAAGCAAAACATGGGGAAAAGAATGAAAGATTTAGAGGGGCGCATGGGATACAGCTCAGGAAAAGTCAACGTCAGGACTGATAAACAAACACGTGATCAGGGTAGCAGAAGTGGAGGTGGCCAAACACTTGGTGTCCATTTCGAAGTTAACGATGCCTCAAGACCTCAAAATGATCATAACCGAGGAAGAGGTGAAACCCAAGGGGTTTACACATCGCCTTCAAGCAGTGATAACAGACAAAGTGGTCAGGAAATCTTTAGGGTCGAGTTCGGCGAGAACGATTCATTGGAAAAATGCTATGTCAATGATTATAACCTTGATACCAAGTTACAAGCTACAATGAAAAAGCTGGTTGATGAACATCGTCAGCACTCAGATGAACTCCGTAAACAGATAACACTGCAGAAAGACTCCTTTGAGAAAGAAAAATCAGCAATGTCCAAAGACTACCATAAGTTATCAGCTACCATTAAGTGTTTGAAGAAGGACATTCATGTTCTCAAACACGAGAGAGAGGGGTTACTCCAGAAACTGCAACGAGAAAGAAGGGATTCAATGCGTCGCGAGGAAAGAATGAAAGACGAAATAACGACCATCAAGAACGAATATGAAGTCAAACTGAAGCAAGGCAATGATAAATCAACAAGAGTCGTCCAAGATTTACACAAGAAGATAAGTATTTCCGAAAGTAAAGTCAAGGAGATCGAGATGAAGTTTAGGAATGAAGTTACTCTAATTGAGCAGAAGTACGCCCAAGAACGCATCCATCTCGAATCAAAAGTTAGAGAAACTGAATATCAAGTGAAATCTAAACTTGAGTTTCATTATCAGGCGAAATTGAAAGGCGAAAACGAAACATTTGAAACTACTCTAAGGGACTTACGCAAAGAAATACAGTGCCTCCAAGACCAACGAAAAGAAATACAGCTCAAACTCTCCCAAGATGCAAGTAGTGGCCGCATAACTATACAAAAAGACACTACTTACAGCTCAACTACGGAAAATGCAGCTCTGTATAAGCGCCTGCAGAAGGAGTTTGAAAATCGATACACGCAAGAAAAACGATTACTGGAAGACACTGTTCGTGATCTTCAAAGAGAAATCAAGGAACTGGAAAAAGAGAAAGATGATATAAAGGCAAGCTACAAAGAAGAAAAGATGGAGATAGAAGAGCAATTCCAGCGAGAGAAACGTAGAATTGAAGAGAGGTATAGACGAGAGAGGGATGAACTCAAACGATCTCTGGACGTGCTGCAATTTAATGATCAGAAGTTCATTTCCATGGGTGGGATGATTGGTCACGAAAAAGAGACTGGACCGAAGGTCTCCAATCCATATCCAGTTATTCAGAAGAATAATGCTTCATTGGAATCAAAAAACCACTTACTAGAAGGTGATATCGCATATTTAAAGGGAAGAGTCCGTGATCTCGAGTCACGCCAAACGAAGCTGCTCTCTTCAAATAACAATAAGTCTTCAAATTCAGGCATGGGTGACCGCAGAGTGCGATTCGATGTCGACAGTCACGCAGTTGGTCACCTACGTCGGTCACTCTCCTACACAGACTTACGCAATGTCAGTAATACCCATAGCAATACAGTAGGCTTGGCCGCTCGTGATTACAATTCTTCAAGTAAAGGTCTTTCACGAGATGATCTGGGGATTTCCACAAGTCGATTAGGTTCAAGGAGCTTTGATTACCAAATGGGTCACAATCAAAGGAACATCTCCAATAACCAAGGTAGTACTTTGGGCGTTTCCGCGGGTACCATTGGAAGTGGCTTTATTGGAAATGAAGCTAGGTATATGGGTATCACCCATATCCCTTCAACTGGGATTATAAATGGCGGGATTGGCCTTGCTGGTAAAGGGGCAGGGTTGTCATTATCTGGACGAAATATTGGATTTGGAGATGGTATGATTGGTCGCGGTGGATCAACCTCTGGTGTTCTGTCTGGAAATAGTATTGGACTCAATTCGGGAATGCTAATTGGTGGAGGTTCCAGCTCTGCAATGCGATCTGGTTATAGTGGGGGCTTGAGTTCAGGTTTTCTATCTGGAAGTGGTGGCGGAATGGGTTCTGGAATGATGAGTGGTGGCTGTGGAGGTTTATGTCCTGGTATTCTTTTTGCTAGAAGTGCtggaatgggttctggtatggtaggaatgggttctggtatggtaggaatgggttcgggtatggcaggtattagcggtggagggttaggttctcgtattcttactggcaatggttgtggaatgggttctggtatggtaggaatgggttctggtatggtaggaattggttctggtatggcaggtattagtggtggaggggtaggttctcgtactcttactggcaatggttgtggaatgggttctggtatggtaggaatgggttctggtatggcagacattagcggtggagggtcatgctctcgtattcttactggcaatggtagtggaatgggttctggtatggtaggaatgggttctggtatggcaggtatttgcggtggagggtcatgctctcgtattcttactggcaatggtagtggaatgggttctggtatggtaggaatgggttctggtatgacagatattagcggtggagggtcatgctctcgtatttttactggcaatggtagtggaatgggttctgatatggtaggaatgggttctggtatggcaggtatgagtggtggagggtcaaattctcgttttgttaccggtaatggtactggaatgagtactggaatgagttctggTATGGTAGGGGATAGTGCTGGAGGGTCAGGTTCTGTGATACTAACTGGAAATGGTGTTGGAATAAGTACTGGTGTGGCAGCTGGTGCTGGCGGATGTTCCAATTCTGGGTTTCATGCTGGTGGCTCCGGTGAATCAAGCACTTTTGTATCTGGTAATGGTAATGTGACGACTTCAGATCTGGCATCTGGGAACAGTGGAAATTCGAGTTCCGAATTACATACTGGTGGATTGAGTTCTGGCCCTGTTACTGGAAATCAGAGTGGTTCAATGCATTCGAATTCAGCGTCTGGTGACGCGTCTGGTCAAGATCTTGCTGGTTCGAACTAA

Transcript

alvinactis_v1_g12480

Protein

alvinactis_v1_g12480

MDNCDCMENSHRCCCGEGHSHIELTGDGGSCCGHLDSSSHHQHDCCHSGGHHEHQDFNKDYHEHRYHQLLQDREEMERNYERERRERKATEEKFQRENRERAMYEEKLVDLNCKLGRYDDDLNLLRNENGFLKNQFDSLRNVINSRVSFESSSFSAPDVTSFQSDSDSVNTESYKHEISVLANENELFKQIIDIINNQAPEENFSEKYTFEGNWRTDPEVTRLQDDNSKLKSQVREVQRNHRELESQLEQVNLDLDNKTRKMKKDISHLEEELHSKSVYCEDLERQLFQVSSEYQEEMQKMEIKIESEVLKKTQMQEEINVFENTVHRLELERIDMVAKLDELYNSENEIILARNELEGRFSTEMNELQIRLEDEIRSKIELSQEMTLLMNEFVDLRNKSNQMEEVYASEIAGLRLNLGAVMGDGAIIQGGGNSMATSNTLSSMQHQNNNNAMVTGQRLPESSGVRQAGNDIQNQLNNEIQKREALERENKDLLYKMKNILSNADPDANDNVEQQSKQYSQYTSVSSNDTVSKSDNSSDVTRKIRTLENKVAELSDECESLRRSAKKRKETENKNHELMDELEELSSERDGMLRKHKTLVNEVDKSSSSLQDLADRNRKLINEIDTSSRRIRDMEDSFRQERNNLIRSYDREKSLDMSDFKRKMEGLEEQLKVQRRENKMLEDKIRGLEDEIDQLKAGQTDHRSSQIVDRGTNRRSVEDSYSGSSNYSKPNTSYSSTTILTAAGTPDNAKDLKRKTTELEKALEGRENDHLSNLEEQRRQLRDEFDKEKQALRQCFEEEKRNLFNSVSGNVGPQSGQVTNVMNTAPHQFSQGTSNVPGNIIPQSGQFGQTVPQMSSQQPLTSHQITHPQNSFQSGTTQQPYTSPQSVAGPQAQYTNYTTGQSSGIPVVQQGVDQMTSFQGPQQPAQFTQQSHFPQQQGVVPQNNQSPIYPTALPGGNKEISQLNETINKLQQEVDRLNMDKQNMGKRMKDLEGRMGYSSGKVNVRTDKQTRDQGSRSGGGQTLGVHFEVNDASRPQNDHNRGRGETQGVYTSPSSSDNRQSGQEIFRVEFGENDSLEKCYVNDYNLDTKLQATMKKLVDEHRQHSDELRKQITLQKDSFEKEKSAMSKDYHKLSATIKCLKKDIHVLKHEREGLLQKLQRERRDSMRREERMKDEITTIKNEYEVKLKQGNDKSTRVVQDLHKKISISESKVKEIEMKFRNEVTLIEQKYAQERIHLESKVRETEYQVKSKLEFHYQAKLKGENETFETTLRDLRKEIQCLQDQRKEIQLKLSQDASSGRITIQKDTTYSSTTENAALYKRLQKEFENRYTQEKRLLEDTVRDLQREIKELEKEKDDIKASYKEEKMEIEEQFQREKRRIEERYRRERDELKRSLDVLQFNDQKFISMGGMIGHEKETGPKVSNPYPVIQKNNASLESKNHLLEGDIAYLKGRVRDLESRQTKLLSSNNNKSSNSGMGDRRVRFDVDSHAVGHLRRSLSYTDLRNVSNTHSNTVGLAARDYNSSSKGLSRDDLGISTSRLGSRSFDYQMGHNQRNISNNQGSTLGVSAGTIGSGFIGNEARYMGITHIPSTGIINGGIGLAGKGAGLSLSGRNIGFGDGMIGRGGSTSGVLSGNSIGLNSGMLIGGGSSSAMRSGYSGGLSSGFLSGSGGGMGSGMMSGGCGGLCPGILFARSAGMGSGMVGMGSGMVGMGSGMAGISGGGLGSRILTGNGCGMGSGMVGMGSGMVGIGSGMAGISGGGVGSRTLTGNGCGMGSGMVGMGSGMADISGGGSCSRILTGNGSGMGSGMVGMGSGMAGICGGGSCSRILTGNGSGMGSGMVGMGSGMTDISGGGSCSRIFTGNGSGMGSDMVGMGSGMAGMSGGGSNSRFVTGNGTGMSTGMSSGMVGDSAGGSGSVILTGNGVGISTGVAAGAGGCSNSGFHAGGSGESSTFVSGNGNVTTSDLASGNSGNSSSELHTGGLSSGPVTGNQSGSMHSNSASGDASGQDLAGSN*

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR23159	CENTROSOMAL PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25392	CCDC88A; girdin	-	Cilium and associated proteins	ko03037	deepkoala