Detailed information of alvinactis_v1_g14013 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:2232106...2234813
NR annotation: XP_028514805.1, tripartite motif-containing protein 3, partial [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O16616E3 ubiquitin-protein ligase trim-21 OS=Caenorhabditis elegans OX=6239 GN=trim-21 PE=1 SV=1
Q922Y2Tripartite motif-containing protein 59 OS=Mus musculus OX=10090 GN=Trim59 PE=1 SV=2
Q5ZMD4Tripartite motif-containing protein 59 OS=Gallus gallus OX=9031 GN=TRIM59 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12015TRIM39; tripartite motif-containing protein 39EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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