Detailed information of alvinactis_v1_g1456 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:24590223...24596212
NR annotation: XP_020913050.1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q56A18SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Rattus norvegicus OX=10116 GN=Smarce1 PE=1 SV=1
Q969G3SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Homo sapiens OX=9606 GN=SMARCE1 PE=1 SV=2
O54941SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Mus musculus OX=10090 GN=Smarce1 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46232SMARCE1 REGULATOR OF CHROMATINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0016922Molecular Functionnuclear receptor bindingInterproscan
GO:0031492Molecular Functionnucleosomal DNA bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11651SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-Chromosome and associated proteinsko03036deepkoala

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